Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 MIR4767-201ENST00000582827 78 ntBASIC25.72■■□□□ 1.71
CDK7P50613 AC096887.2-201ENST00000623443 1957 ntBASIC25.72■■□□□ 1.71
CDK7P50613 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
CDK7P50613 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CDK7P50613 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC25.71■■□□□ 1.71
CDK7P50613 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
CDK7P50613 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC25.71■■□□□ 1.71
CDK7P50613 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC25.71■■□□□ 1.71
CDK7P50613 AC087623.3-201ENST00000607047 1098 ntBASIC25.71■■□□□ 1.71
CDK7P50613 RASA4CP-201ENST00000424092 1398 ntBASIC25.7■■□□□ 1.71
CDK7P50613 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC25.7■■□□□ 1.7
CDK7P50613 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.7
CDK7P50613 MAG-206ENST00000597035 542 ntTSL 4 BASIC25.7■■□□□ 1.7
CDK7P50613 AC092171.4-201ENST00000609130 632 ntBASIC25.7■■□□□ 1.7
CDK7P50613 CA15P2-201ENST00000611168 834 ntBASIC25.7■■□□□ 1.7
CDK7P50613 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
CDK7P50613 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC25.69■■□□□ 1.7
CDK7P50613 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC25.69■■□□□ 1.7
CDK7P50613 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC25.69■■□□□ 1.7
CDK7P50613 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CDK7P50613 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC25.69■■□□□ 1.7
CDK7P50613 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CDK7P50613 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CDK7P50613 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC25.68■■□□□ 1.7
CDK7P50613 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CDK7P50613 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
CDK7P50613 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC25.68■■□□□ 1.7
CDK7P50613 SERBP1P1-201ENST00000396021 1160 ntBASIC25.68■■□□□ 1.7
CDK7P50613 PTMA-205ENST00000410064 814 ntTSL 2 BASIC25.68■■□□□ 1.7
CDK7P50613 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC25.68■■□□□ 1.7
CDK7P50613 PLD4-205ENST00000553861 667 ntTSL 2 BASIC25.68■■□□□ 1.7
CDK7P50613 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
CDK7P50613 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
CDK7P50613 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC25.68■■□□□ 1.7
CDK7P50613 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CDK7P50613 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CDK7P50613 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CDK7P50613 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CDK7P50613 AL162430.1-201ENST00000480705 870 ntBASIC25.67■■□□□ 1.7
CDK7P50613 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CDK7P50613 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CDK7P50613 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CDK7P50613 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
CDK7P50613 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC25.66■■□□□ 1.7
CDK7P50613 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CDK7P50613 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
CDK7P50613 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
CDK7P50613 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
CDK7P50613 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC25.66■■□□□ 1.7
CDK7P50613 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
CDK7P50613 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC25.65■■□□□ 1.7
CDK7P50613 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CDK7P50613 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC25.65■■□□□ 1.7
CDK7P50613 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CDK7P50613 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CDK7P50613 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC25.65■■□□□ 1.7
CDK7P50613 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.7
CDK7P50613 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CDK7P50613 AC135731.1-201ENST00000569415 2548 ntBASIC25.64■■□□□ 1.7
CDK7P50613 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CDK7P50613 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CDK7P50613 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CDK7P50613 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CDK7P50613 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
CDK7P50613 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC25.64■■□□□ 1.7
CDK7P50613 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CDK7P50613 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.69
CDK7P50613 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
CDK7P50613 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.69
CDK7P50613 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
CDK7P50613 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CDK7P50613 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC25.63■■□□□ 1.69
CDK7P50613 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
CDK7P50613 REST-206ENST00000612429 1376 ntTSL 5 BASIC25.63■■□□□ 1.69
CDK7P50613 REST-207ENST00000616975 1370 ntTSL 5 BASIC25.63■■□□□ 1.69
CDK7P50613 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CDK7P50613 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
CDK7P50613 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC25.63■■□□□ 1.69
CDK7P50613 ERN1-208ENST00000606895 2068 ntBASIC25.62■■□□□ 1.69
CDK7P50613 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
CDK7P50613 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CDK7P50613 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CDK7P50613 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CDK7P50613 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CDK7P50613 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC25.62■■□□□ 1.69
CDK7P50613 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
CDK7P50613 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CDK7P50613 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC25.61■■□□□ 1.69
CDK7P50613 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC25.61■■□□□ 1.69
CDK7P50613 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC25.61■■□□□ 1.69
CDK7P50613 AC027682.1-201ENST00000562846 899 ntBASIC25.61■■□□□ 1.69
CDK7P50613 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC25.61■■□□□ 1.69
CDK7P50613 AC099791.2-201ENST00000605725 427 ntBASIC25.61■■□□□ 1.69
CDK7P50613 AL138724.1-201ENST00000606771 1088 ntBASIC25.61■■□□□ 1.69
CDK7P50613 AC011298.3-201ENST00000615796 283 ntBASIC25.61■■□□□ 1.69
CDK7P50613 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC25.61■■□□□ 1.69
CDK7P50613 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
CDK7P50613 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
CDK7P50613 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CDK7P50613 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC25.6■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms