Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 DUX4L12-201ENST00000614593 1267 ntBASIC18.85■□□□□ 0.61
NKX2-1P43699 DUX4L14-201ENST00000621227 1267 ntBASIC18.85■□□□□ 0.61
NKX2-1P43699 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
NKX2-1P43699 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NKX2-1P43699 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NKX2-1P43699 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NKX2-1P43699 AC233723.2-201ENST00000623798 2106 ntBASIC18.85■□□□□ 0.61
NKX2-1P43699 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NKX2-1P43699 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NKX2-1P43699 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NKX2-1P43699 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC18.84■□□□□ 0.61
NKX2-1P43699 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
NKX2-1P43699 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NKX2-1P43699 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
NKX2-1P43699 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NKX2-1P43699 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NKX2-1P43699 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC18.83■□□□□ 0.61
NKX2-1P43699 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
NKX2-1P43699 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NKX2-1P43699 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
NKX2-1P43699 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
NKX2-1P43699 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.6
NKX2-1P43699 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
NKX2-1P43699 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NKX2-1P43699 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
NKX2-1P43699 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC18.82■□□□□ 0.6
NKX2-1P43699 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NKX2-1P43699 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
NKX2-1P43699 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC18.82■□□□□ 0.6
NKX2-1P43699 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC18.82■□□□□ 0.6
NKX2-1P43699 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NKX2-1P43699 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NKX2-1P43699 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NKX2-1P43699 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NKX2-1P43699 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC18.81■□□□□ 0.6
NKX2-1P43699 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NKX2-1P43699 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
NKX2-1P43699 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NKX2-1P43699 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NKX2-1P43699 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NKX2-1P43699 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NKX2-1P43699 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NKX2-1P43699 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC18.81■□□□□ 0.6
NKX2-1P43699 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NKX2-1P43699 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NKX2-1P43699 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NKX2-1P43699 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC18.8■□□□□ 0.6
NKX2-1P43699 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NKX2-1P43699 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC18.8■□□□□ 0.6
NKX2-1P43699 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NKX2-1P43699 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NKX2-1P43699 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
NKX2-1P43699 ZNRF2P2-203ENST00000454624 420 ntBASIC18.8■□□□□ 0.6
NKX2-1P43699 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NKX2-1P43699 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.8■□□□□ 0.6
NKX2-1P43699 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
NKX2-1P43699 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NKX2-1P43699 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NKX2-1P43699 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
NKX2-1P43699 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
NKX2-1P43699 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
NKX2-1P43699 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NKX2-1P43699 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NKX2-1P43699 PFN2-211ENST00000489155 636 ntTSL 4 BASIC18.79■□□□□ 0.6
NKX2-1P43699 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC18.79■□□□□ 0.6
NKX2-1P43699 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NKX2-1P43699 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NKX2-1P43699 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
NKX2-1P43699 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NKX2-1P43699 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NKX2-1P43699 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
NKX2-1P43699 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
NKX2-1P43699 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NKX2-1P43699 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
NKX2-1P43699 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.78■□□□□ 0.6
NKX2-1P43699 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NKX2-1P43699 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
NKX2-1P43699 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NKX2-1P43699 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NKX2-1P43699 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NKX2-1P43699 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
NKX2-1P43699 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
NKX2-1P43699 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NKX2-1P43699 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NKX2-1P43699 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
NKX2-1P43699 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NKX2-1P43699 EP400NL-214ENST00000641289 2402 ntBASIC18.77■□□□□ 0.6
NKX2-1P43699 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NKX2-1P43699 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
NKX2-1P43699 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.77■□□□□ 0.59
NKX2-1P43699 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NKX2-1P43699 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC18.76■□□□□ 0.59
NKX2-1P43699 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC18.76■□□□□ 0.59
NKX2-1P43699 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NKX2-1P43699 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NKX2-1P43699 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NKX2-1P43699 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC18.76■□□□□ 0.59
NKX2-1P43699 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
NKX2-1P43699 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NKX2-1P43699 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms