Protein–RNA interactions for Protein: P40070

LSM4, U6 snRNA-associated Sm-like protein LSm4, yeastyeast

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM4P40070 PRP46YPL151C 1356 nt4.58□□□□□ -1.68
LSM4P40070 ARO2YGL148W 1131 nt4.58□□□□□ -1.68
LSM4P40070 tN(GUU)CtN(GUU)C 74 nt4.58□□□□□ -1.68
LSM4P40070 tN(GUU)FtN(GUU)F 74 nt4.58□□□□□ -1.68
LSM4P40070 tN(GUU)GtN(GUU)G 74 nt4.58□□□□□ -1.68
LSM4P40070 tN(GUU)KtN(GUU)K 74 nt4.58□□□□□ -1.68
LSM4P40070 tN(GUU)LtN(GUU)L 74 nt4.58□□□□□ -1.68
LSM4P40070 tN(GUU)N1tN(GUU)N1 74 nt4.58□□□□□ -1.68
LSM4P40070 tN(GUU)N2tN(GUU)N2 74 nt4.58□□□□□ -1.68
LSM4P40070 tN(GUU)O1tN(GUU)O1 74 nt4.58□□□□□ -1.68
LSM4P40070 tN(GUU)O2tN(GUU)O2 74 nt4.58□□□□□ -1.68
LSM4P40070 tN(GUU)PtN(GUU)P 74 nt4.58□□□□□ -1.68
LSM4P40070 COS9YKL219W 1224 nt4.58□□□□□ -1.68
LSM4P40070 SFI1YLL003W 2841 nt4.58□□□□□ -1.68
LSM4P40070 GLT1YDL171C 6438 nt4.58□□□□□ -1.68
LSM4P40070 TPS3YMR261C 3165 nt4.57□□□□□ -1.68
LSM4P40070 RPL12AYEL054C 498 nt4.57□□□□□ -1.68
LSM4P40070 ETR1YBR026C 1143 nt4.57□□□□□ -1.68
LSM4P40070 MTC1YJL123C 1437 nt4.56□□□□□ -1.68
LSM4P40070 AAD4YDL243C 990 nt4.56□□□□□ -1.68
LSM4P40070 YML101C-AYML101C-A 318 nt4.56□□□□□ -1.68
LSM4P40070 YBL044WYBL044W 369 nt4.56□□□□□ -1.68
LSM4P40070 MLC2YPR188C 492 nt4.56□□□□□ -1.68
LSM4P40070 MSS116YDR194C 1995 nt4.56□□□□□ -1.68
LSM4P40070 GAS3YMR215W 1575 nt4.56□□□□□ -1.68
LSM4P40070 YGL036WYGL036W 2730 nt4.55□□□□□ -1.68
LSM4P40070 TFC7YOR110W 1308 nt4.55□□□□□ -1.68
LSM4P40070 GPR1YDL035C 2886 nt4.55□□□□□ -1.68
LSM4P40070 GCS1YDL226C 1059 nt4.55□□□□□ -1.68
LSM4P40070 YHR127WYHR127W 732 nt4.55□□□□□ -1.68
LSM4P40070 APS3YJL024C 585 nt4.55□□□□□ -1.68
LSM4P40070 MRP21YBL090W 534 nt4.55□□□□□ -1.68
LSM4P40070 CDC21YOR074C 915 nt4.55□□□□□ -1.68
LSM4P40070 YDR261C-DYDR261C-D 4815 nt4.55□□□□□ -1.68
LSM4P40070 EMP46YLR080W 1335 nt4.54□□□□□ -1.68
LSM4P40070 YMD8YML038C 1329 nt4.54□□□□□ -1.68
LSM4P40070 RPS16BYDL083C 432 nt4.54□□□□□ -1.68
LSM4P40070 RPB4YJL140W 666 nt4.54□□□□□ -1.68
LSM4P40070 CBC2YPL178W 627 nt4.54□□□□□ -1.68
LSM4P40070 MGS1YNL218W 1764 nt4.54□□□□□ -1.68
LSM4P40070 CPS1YJL172W 1731 nt4.54□□□□□ -1.68
LSM4P40070 SEC9YGR009C 1956 nt4.53□□□□□ -1.68
LSM4P40070 RAD16YBR114W 2373 nt4.53□□□□□ -1.68
LSM4P40070 ATO3YDR384C 828 nt4.53□□□□□ -1.68
LSM4P40070 PXR1YGR280C 816 nt4.53□□□□□ -1.68
LSM4P40070 LYS12YIL094C 1116 nt4.53□□□□□ -1.68
LSM4P40070 DJP1YIR004W 1299 nt4.53□□□□□ -1.68
LSM4P40070 POM33YLL023C 840 nt4.53□□□□□ -1.68
LSM4P40070 ATG33YLR356W 594 nt4.53□□□□□ -1.68
LSM4P40070 UGA1YGR019W 1416 nt4.53□□□□□ -1.68
LSM4P40070 PXA1YPL147W 2613 nt4.53□□□□□ -1.68
LSM4P40070 PCA1YBR295W 3651 nt4.52□□□□□ -1.69
LSM4P40070 DBF2YGR092W 1719 nt4.52□□□□□ -1.69
LSM4P40070 FHL1YPR104C 2811 nt4.52□□□□□ -1.69
LSM4P40070 KCH1YJR054W 1494 nt4.52□□□□□ -1.69
LSM4P40070 HOF1YMR032W 2010 nt4.52□□□□□ -1.69
LSM4P40070 PIF1YML061C 2580 nt4.52□□□□□ -1.69
LSM4P40070 RPS15YOL040C 429 nt4.52□□□□□ -1.69
LSM4P40070 NPT1YOR209C 1290 nt4.52□□□□□ -1.69
LSM4P40070 TGS1YPL157W 948 nt4.52□□□□□ -1.69
LSM4P40070 PRO2YOR323C 1371 nt4.52□□□□□ -1.69
LSM4P40070 YML082WYML082W 1950 nt4.51□□□□□ -1.69
LSM4P40070 RPL34AYER056C-A 366 nt4.51□□□□□ -1.69
LSM4P40070 CTR3YLR411W 726 nt4.51□□□□□ -1.69
LSM4P40070 OAZ1YPL052W 879 nt4.51□□□□□ -1.69
LSM4P40070 GRE1YPL223C 507 nt4.51□□□□□ -1.69
LSM4P40070 YIL067CYIL067C 2037 nt4.51□□□□□ -1.69
LSM4P40070 MLF3YNL074C 1359 nt4.51□□□□□ -1.69
LSM4P40070 BRF1YGR246C 1791 nt4.5□□□□□ -1.69
LSM4P40070 AUA1YFL010W-A 285 nt4.5□□□□□ -1.69
LSM4P40070 YJL068CYJL068C 900 nt4.5□□□□□ -1.69
LSM4P40070 RCK1YGL158W 1539 nt4.5□□□□□ -1.69
LSM4P40070 PHO8YDR481C 1701 nt4.49□□□□□ -1.69
LSM4P40070 PEX29YDR479C 1665 nt4.49□□□□□ -1.69
LSM4P40070 SCS2YER120W 735 nt4.49□□□□□ -1.69
LSM4P40070 TEF4YKL081W 1239 nt4.49□□□□□ -1.69
LSM4P40070 YLL059CYLL059C 507 nt4.49□□□□□ -1.69
LSM4P40070 RPL3YOR063W 1164 nt4.49□□□□□ -1.69
LSM4P40070 SNF3YDL194W 2655 nt4.49□□□□□ -1.69
LSM4P40070 MPP10YJR002W 1782 nt4.49□□□□□ -1.69
LSM4P40070 NUP1YOR098C 3231 nt4.48□□□□□ -1.69
LSM4P40070 VHC1YBR235W 3363 nt4.48□□□□□ -1.69
LSM4P40070 SRG1SRG1 551 nt4.48□□□□□ -1.69
LSM4P40070 YDR134CYDR134C 411 nt4.48□□□□□ -1.69
LSM4P40070 SEC20YDR498C 1152 nt4.48□□□□□ -1.69
LSM4P40070 ORM1YGR038W 669 nt4.48□□□□□ -1.69
LSM4P40070 TDH3YGR192C 999 nt4.48□□□□□ -1.69
LSM4P40070 IPI1YHR085W 1005 nt4.48□□□□□ -1.69
LSM4P40070 LEM3YNL323W 1245 nt4.48□□□□□ -1.69
LSM4P40070 SER1YOR184W 1188 nt4.48□□□□□ -1.69
LSM4P40070 AFT1YGL071W 2073 nt4.48□□□□□ -1.69
LSM4P40070 FAA3YIL009W 2085 nt4.48□□□□□ -1.69
LSM4P40070 FAA4YMR246W 2085 nt4.48□□□□□ -1.69
LSM4P40070 KDX1YKL161C 1302 nt4.47□□□□□ -1.69
LSM4P40070 MSC7YHR039C 1935 nt4.47□□□□□ -1.69
LSM4P40070 FHN1YGR131W 525 nt4.47□□□□□ -1.69
LSM4P40070 CAB4YGR277C 918 nt4.47□□□□□ -1.69
LSM4P40070 YHL049CYHL049C 816 nt4.47□□□□□ -1.69
LSM4P40070 YJL107CYJL107C 1164 nt4.47□□□□□ -1.69
LSM4P40070 SPC34YKR037C 888 nt4.47□□□□□ -1.69
Retrieved 100 of 7,029 protein–RNA pairs in 21.7 ms