Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
TNFSF4P23510 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TNFSF4P23510 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TNFSF4P23510 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
TNFSF4P23510 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TNFSF4P23510 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TNFSF4P23510 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TNFSF4P23510 AC021242.3-201ENST00000607598 1377 ntBASIC19.7■□□□□ 0.74
TNFSF4P23510 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TNFSF4P23510 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TNFSF4P23510 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TNFSF4P23510 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
TNFSF4P23510 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TNFSF4P23510 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TNFSF4P23510 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.69■□□□□ 0.74
TNFSF4P23510 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
TNFSF4P23510 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TNFSF4P23510 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
TNFSF4P23510 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TNFSF4P23510 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TNFSF4P23510 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNFSF4P23510 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNFSF4P23510 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC19.68■□□□□ 0.74
TNFSF4P23510 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
TNFSF4P23510 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TNFSF4P23510 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNFSF4P23510 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNFSF4P23510 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.68■□□□□ 0.74
TNFSF4P23510 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.68■□□□□ 0.74
TNFSF4P23510 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.68■□□□□ 0.74
TNFSF4P23510 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.68■□□□□ 0.74
TNFSF4P23510 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.68■□□□□ 0.74
TNFSF4P23510 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNFSF4P23510 AF131216.4-201ENST00000638924 1588 ntBASIC19.68■□□□□ 0.74
TNFSF4P23510 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TNFSF4P23510 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
TNFSF4P23510 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.67■□□□□ 0.74
TNFSF4P23510 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TNFSF4P23510 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.66■□□□□ 0.74
TNFSF4P23510 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC19.66■□□□□ 0.74
TNFSF4P23510 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.66■□□□□ 0.74
TNFSF4P23510 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TNFSF4P23510 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TNFSF4P23510 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.66■□□□□ 0.74
TNFSF4P23510 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TNFSF4P23510 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TNFSF4P23510 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TNFSF4P23510 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.65■□□□□ 0.74
TNFSF4P23510 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
TNFSF4P23510 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
TNFSF4P23510 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
TNFSF4P23510 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.65■□□□□ 0.74
TNFSF4P23510 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.65■□□□□ 0.74
TNFSF4P23510 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.65■□□□□ 0.74
TNFSF4P23510 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.65■□□□□ 0.74
TNFSF4P23510 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TNFSF4P23510 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
TNFSF4P23510 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TNFSF4P23510 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TNFSF4P23510 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.65■□□□□ 0.74
TNFSF4P23510 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TNFSF4P23510 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TNFSF4P23510 AC138932.3-201ENST00000567634 1902 ntBASIC19.64■□□□□ 0.74
TNFSF4P23510 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TNFSF4P23510 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.64■□□□□ 0.73
TNFSF4P23510 AC092028.1-203ENST00000608262 953 ntBASIC19.64■□□□□ 0.73
TNFSF4P23510 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
TNFSF4P23510 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.64■□□□□ 0.73
TNFSF4P23510 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TNFSF4P23510 AL022069.1-201ENST00000568025 1636 ntBASIC19.64■□□□□ 0.73
TNFSF4P23510 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.64■□□□□ 0.73
TNFSF4P23510 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TNFSF4P23510 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TNFSF4P23510 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TNFSF4P23510 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TNFSF4P23510 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TNFSF4P23510 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
TNFSF4P23510 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TNFSF4P23510 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TNFSF4P23510 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.63■□□□□ 0.73
TNFSF4P23510 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TNFSF4P23510 GUSBP5-201ENST00000418136 578 ntBASIC19.63■□□□□ 0.73
TNFSF4P23510 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TNFSF4P23510 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TNFSF4P23510 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
TNFSF4P23510 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TNFSF4P23510 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.62■□□□□ 0.73
TNFSF4P23510 AL161729.1-201ENST00000604104 1402 ntBASIC19.62■□□□□ 0.73
TNFSF4P23510 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TNFSF4P23510 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.62■□□□□ 0.73
TNFSF4P23510 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
TNFSF4P23510 HLA-L-211ENST00000482052 1765 ntBASIC19.62■□□□□ 0.73
TNFSF4P23510 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.62■□□□□ 0.73
TNFSF4P23510 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TNFSF4P23510 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.61■□□□□ 0.73
TNFSF4P23510 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TNFSF4P23510 TSPY9P-201ENST00000440215 945 ntBASIC19.61■□□□□ 0.73
TNFSF4P23510 TSPY11P-201ENST00000442607 1045 ntBASIC19.61■□□□□ 0.73
TNFSF4P23510 MTDHP2-201ENST00000601468 714 ntBASIC19.61■□□□□ 0.73
TNFSF4P23510 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms