Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCL1P22362 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCL1P22362 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCL1P22362 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.96■□□□□ 0.79
CCL1P22362 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCL1P22362 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCL1P22362 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCL1P22362 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.96■□□□□ 0.79
CCL1P22362 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
CCL1P22362 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.96■□□□□ 0.79
CCL1P22362 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCL1P22362 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
CCL1P22362 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCL1P22362 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.95■□□□□ 0.78
CCL1P22362 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCL1P22362 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
CCL1P22362 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.95■□□□□ 0.78
CCL1P22362 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.95■□□□□ 0.78
CCL1P22362 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCL1P22362 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.95■□□□□ 0.78
CCL1P22362 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCL1P22362 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCL1P22362 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCL1P22362 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCL1P22362 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCL1P22362 AC068473.5-201ENST00000616428 2072 ntBASIC19.94■□□□□ 0.78
CCL1P22362 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCL1P22362 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.94■□□□□ 0.78
CCL1P22362 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.93■□□□□ 0.78
CCL1P22362 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CCL1P22362 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.93■□□□□ 0.78
CCL1P22362 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCL1P22362 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CCL1P22362 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CCL1P22362 KRT18P60-201ENST00000312876 1297 ntBASIC19.93■□□□□ 0.78
CCL1P22362 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCL1P22362 AC011551.1-201ENST00000614101 683 ntBASIC19.93■□□□□ 0.78
CCL1P22362 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC19.93■□□□□ 0.78
CCL1P22362 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CCL1P22362 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.93■□□□□ 0.78
CCL1P22362 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.93■□□□□ 0.78
CCL1P22362 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCL1P22362 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCL1P22362 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCL1P22362 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCL1P22362 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CCL1P22362 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCL1P22362 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCL1P22362 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCL1P22362 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCL1P22362 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
CCL1P22362 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCL1P22362 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCL1P22362 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCL1P22362 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCL1P22362 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCL1P22362 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCL1P22362 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CCL1P22362 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCL1P22362 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCL1P22362 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCL1P22362 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.91■□□□□ 0.78
CCL1P22362 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCL1P22362 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCL1P22362 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC19.91■□□□□ 0.78
CCL1P22362 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.91■□□□□ 0.78
CCL1P22362 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.91■□□□□ 0.78
CCL1P22362 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.91■□□□□ 0.78
CCL1P22362 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCL1P22362 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCL1P22362 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCL1P22362 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CCL1P22362 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC19.9■□□□□ 0.78
CCL1P22362 AC019171.1-201ENST00000601251 1056 ntBASIC19.9■□□□□ 0.78
CCL1P22362 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCL1P22362 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.9■□□□□ 0.78
CCL1P22362 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCL1P22362 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.9■□□□□ 0.78
CCL1P22362 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCL1P22362 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.9■□□□□ 0.78
CCL1P22362 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCL1P22362 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCL1P22362 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCL1P22362 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC19.89■□□□□ 0.77
CCL1P22362 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCL1P22362 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC19.89■□□□□ 0.77
CCL1P22362 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC19.89■□□□□ 0.77
CCL1P22362 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.89■□□□□ 0.77
CCL1P22362 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.89■□□□□ 0.77
CCL1P22362 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.89■□□□□ 0.77
CCL1P22362 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.88■□□□□ 0.77
CCL1P22362 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCL1P22362 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCL1P22362 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCL1P22362 HYI-210ENST00000486909 905 ntTSL 5 BASIC19.88■□□□□ 0.77
CCL1P22362 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CCL1P22362 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCL1P22362 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCL1P22362 AC133561.1-201ENST00000568600 2415 ntBASIC19.87■□□□□ 0.77
CCL1P22362 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms