Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC28.82■■■□□ 2.2
KCNA3P22001 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
KCNA3P22001 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
KCNA3P22001 AC139426.1-201ENST00000568218 2529 ntBASIC28.82■■■□□ 2.2
KCNA3P22001 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
KCNA3P22001 AK1-201ENST00000223836 736 ntTSL 3 BASIC28.81■■■□□ 2.2
KCNA3P22001 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
KCNA3P22001 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
KCNA3P22001 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
KCNA3P22001 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC28.81■■■□□ 2.2
KCNA3P22001 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC28.81■■■□□ 2.2
KCNA3P22001 DENND3-207ENST00000518347 850 ntTSL 2 BASIC28.81■■■□□ 2.2
KCNA3P22001 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
KCNA3P22001 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
KCNA3P22001 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
KCNA3P22001 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
KCNA3P22001 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC28.8■■■□□ 2.2
KCNA3P22001 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC28.8■■■□□ 2.2
KCNA3P22001 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
KCNA3P22001 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC28.8■■■□□ 2.2
KCNA3P22001 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC28.8■■■□□ 2.2
KCNA3P22001 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
KCNA3P22001 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC28.79■■■□□ 2.2
KCNA3P22001 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
KCNA3P22001 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
KCNA3P22001 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
KCNA3P22001 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC28.79■■■□□ 2.2
KCNA3P22001 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC28.78■■■□□ 2.2
KCNA3P22001 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
KCNA3P22001 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
KCNA3P22001 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC28.78■■■□□ 2.2
KCNA3P22001 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
KCNA3P22001 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
KCNA3P22001 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
KCNA3P22001 HES6-206ENST00000409574 738 ntTSL 2 BASIC28.77■■■□□ 2.2
KCNA3P22001 SLC47A1P1-202ENST00000449666 945 ntBASIC28.77■■■□□ 2.2
KCNA3P22001 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC28.77■■■□□ 2.2
KCNA3P22001 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
KCNA3P22001 MPST-208ENST00000628507 698 ntTSL 5 BASIC28.77■■■□□ 2.2
KCNA3P22001 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
KCNA3P22001 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
KCNA3P22001 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
KCNA3P22001 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC28.76■■■□□ 2.19
KCNA3P22001 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC28.76■■■□□ 2.19
KCNA3P22001 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
KCNA3P22001 ID1-201ENST00000376105 1233 ntBASIC28.76■■■□□ 2.19
KCNA3P22001 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC28.76■■■□□ 2.19
KCNA3P22001 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC28.76■■■□□ 2.19
KCNA3P22001 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC28.76■■■□□ 2.19
KCNA3P22001 AC136469.2-201ENST00000623944 1028 ntBASIC28.76■■■□□ 2.19
KCNA3P22001 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC28.76■■■□□ 2.19
KCNA3P22001 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
KCNA3P22001 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
KCNA3P22001 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC28.75■■■□□ 2.19
KCNA3P22001 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
KCNA3P22001 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
KCNA3P22001 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC28.75■■■□□ 2.19
KCNA3P22001 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC28.75■■■□□ 2.19
KCNA3P22001 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
KCNA3P22001 DUX4L2-201ENST00000561772 1275 ntBASIC28.75■■■□□ 2.19
KCNA3P22001 AC233992.3-201ENST00000607491 485 ntBASIC28.75■■■□□ 2.19
KCNA3P22001 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC28.75■■■□□ 2.19
KCNA3P22001 DUX4L6-201ENST00000626483 1275 ntBASIC28.75■■■□□ 2.19
KCNA3P22001 DUX4L1-201ENST00000627662 1275 ntBASIC28.75■■■□□ 2.19
KCNA3P22001 DUX4L8-201ENST00000629013 1275 ntBASIC28.75■■■□□ 2.19
KCNA3P22001 DUX4L3-201ENST00000630187 1275 ntBASIC28.75■■■□□ 2.19
KCNA3P22001 DUX4L7-201ENST00000630678 1275 ntBASIC28.75■■■□□ 2.19
KCNA3P22001 DUX4L5-201ENST00000630834 1275 ntBASIC28.75■■■□□ 2.19
KCNA3P22001 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
KCNA3P22001 REST-206ENST00000612429 1376 ntTSL 5 BASIC28.75■■■□□ 2.19
KCNA3P22001 REST-207ENST00000616975 1370 ntTSL 5 BASIC28.75■■■□□ 2.19
KCNA3P22001 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
KCNA3P22001 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
KCNA3P22001 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
KCNA3P22001 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC28.74■■■□□ 2.19
KCNA3P22001 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC28.74■■■□□ 2.19
KCNA3P22001 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC28.73■■■□□ 2.19
KCNA3P22001 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC28.73■■■□□ 2.19
KCNA3P22001 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC28.73■■■□□ 2.19
KCNA3P22001 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC28.73■■■□□ 2.19
KCNA3P22001 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC28.73■■■□□ 2.19
KCNA3P22001 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC28.73■■■□□ 2.19
KCNA3P22001 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC28.73■■■□□ 2.19
KCNA3P22001 AC009102.2-201ENST00000606772 1639 ntBASIC28.72■■■□□ 2.19
KCNA3P22001 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
KCNA3P22001 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
KCNA3P22001 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC28.72■■■□□ 2.19
KCNA3P22001 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC28.72■■■□□ 2.19
KCNA3P22001 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
KCNA3P22001 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
KCNA3P22001 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
KCNA3P22001 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
KCNA3P22001 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
KCNA3P22001 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC28.71■■■□□ 2.19
KCNA3P22001 AC004911.1-201ENST00000416316 871 ntBASIC28.71■■■□□ 2.19
KCNA3P22001 YBX1P1-201ENST00000445822 960 ntBASIC28.71■■■□□ 2.19
KCNA3P22001 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
KCNA3P22001 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC28.7■■■□□ 2.19
KCNA3P22001 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC28.7■■■□□ 2.19
KCNA3P22001 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC28.7■■■□□ 2.18
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms