Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ATF4P18848 AL137060.1-201ENST00000618151 2648 ntBASIC19.13■□□□□ 0.65
ATF4P18848 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.13■□□□□ 0.65
ATF4P18848 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.12■□□□□ 0.65
ATF4P18848 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATF4P18848 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ATF4P18848 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.12■□□□□ 0.65
ATF4P18848 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATF4P18848 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATF4P18848 HLA-V-202ENST00000446817 847 ntBASIC19.12■□□□□ 0.65
ATF4P18848 CALM3-209ENST00000597743 577 ntTSL 4 BASIC19.12■□□□□ 0.65
ATF4P18848 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATF4P18848 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATF4P18848 AC022211.4-201ENST00000625094 2161 ntBASIC19.12■□□□□ 0.65
ATF4P18848 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATF4P18848 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
ATF4P18848 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
ATF4P18848 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATF4P18848 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ATF4P18848 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.11■□□□□ 0.65
ATF4P18848 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
ATF4P18848 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
ATF4P18848 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATF4P18848 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATF4P18848 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
ATF4P18848 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATF4P18848 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
ATF4P18848 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATF4P18848 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
ATF4P18848 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC19.1■□□□□ 0.65
ATF4P18848 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATF4P18848 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATF4P18848 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATF4P18848 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATF4P18848 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
ATF4P18848 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
ATF4P18848 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.09■□□□□ 0.65
ATF4P18848 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC19.09■□□□□ 0.65
ATF4P18848 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATF4P18848 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATF4P18848 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATF4P18848 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATF4P18848 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
ATF4P18848 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
ATF4P18848 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATF4P18848 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATF4P18848 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATF4P18848 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ATF4P18848 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.09■□□□□ 0.65
ATF4P18848 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ATF4P18848 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.09■□□□□ 0.65
ATF4P18848 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ATF4P18848 AC073130.3-201ENST00000624389 2278 ntBASIC19.08■□□□□ 0.65
ATF4P18848 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
ATF4P18848 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
ATF4P18848 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ATF4P18848 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ATF4P18848 MACF1-219ENST00000484793 834 ntTSL 2 BASIC19.08■□□□□ 0.64
ATF4P18848 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC19.08■□□□□ 0.64
ATF4P18848 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ATF4P18848 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.64
ATF4P18848 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
ATF4P18848 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
ATF4P18848 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.07■□□□□ 0.64
ATF4P18848 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATF4P18848 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATF4P18848 MBP-237ENST00000579129 1052 ntTSL 5 BASIC19.07■□□□□ 0.64
ATF4P18848 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATF4P18848 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATF4P18848 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ATF4P18848 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATF4P18848 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATF4P18848 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
ATF4P18848 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.06■□□□□ 0.64
ATF4P18848 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.06■□□□□ 0.64
ATF4P18848 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
ATF4P18848 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATF4P18848 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.05■□□□□ 0.64
ATF4P18848 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.05■□□□□ 0.64
ATF4P18848 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATF4P18848 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC19.05■□□□□ 0.64
ATF4P18848 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ATF4P18848 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC19.05■□□□□ 0.64
ATF4P18848 AC021231.2-201ENST00000594613 730 ntBASIC19.05■□□□□ 0.64
ATF4P18848 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ATF4P18848 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATF4P18848 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.05■□□□□ 0.64
ATF4P18848 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ATF4P18848 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATF4P18848 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
ATF4P18848 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
ATF4P18848 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ATF4P18848 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATF4P18848 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATF4P18848 WHAMMP3-201ENST00000611636 1609 ntBASIC19.04■□□□□ 0.64
ATF4P18848 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ATF4P18848 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
ATF4P18848 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC19.04■□□□□ 0.64
ATF4P18848 AC233723.2-201ENST00000623798 2106 ntBASIC19.04■□□□□ 0.64
ATF4P18848 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms