Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
CSB-PGBD3P0DP91 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC30.96■■■□□ 2.55
CSB-PGBD3P0DP91 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC30.95■■■□□ 2.55
CSB-PGBD3P0DP91 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC30.95■■■□□ 2.55
CSB-PGBD3P0DP91 MAG-206ENST00000597035 542 ntTSL 4 BASIC30.95■■■□□ 2.55
CSB-PGBD3P0DP91 AC092171.4-201ENST00000609130 632 ntBASIC30.95■■■□□ 2.55
CSB-PGBD3P0DP91 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC30.95■■■□□ 2.55
CSB-PGBD3P0DP91 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
CSB-PGBD3P0DP91 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
CSB-PGBD3P0DP91 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
CSB-PGBD3P0DP91 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
CSB-PGBD3P0DP91 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC30.94■■■□□ 2.54
CSB-PGBD3P0DP91 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
CSB-PGBD3P0DP91 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC30.94■■■□□ 2.54
CSB-PGBD3P0DP91 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
CSB-PGBD3P0DP91 PTMA-205ENST00000410064 814 ntTSL 2 BASIC30.94■■■□□ 2.54
CSB-PGBD3P0DP91 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC30.94■■■□□ 2.54
CSB-PGBD3P0DP91 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
CSB-PGBD3P0DP91 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC30.94■■■□□ 2.54
CSB-PGBD3P0DP91 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC30.94■■■□□ 2.54
CSB-PGBD3P0DP91 REST-206ENST00000612429 1376 ntTSL 5 BASIC30.93■■■□□ 2.54
CSB-PGBD3P0DP91 REST-207ENST00000616975 1370 ntTSL 5 BASIC30.93■■■□□ 2.54
CSB-PGBD3P0DP91 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC30.93■■■□□ 2.54
CSB-PGBD3P0DP91 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC30.93■■■□□ 2.54
CSB-PGBD3P0DP91 MIR6821-201ENST00000617625 74 ntBASIC30.93■■■□□ 2.54
CSB-PGBD3P0DP91 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
CSB-PGBD3P0DP91 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
CSB-PGBD3P0DP91 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
CSB-PGBD3P0DP91 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC30.92■■■□□ 2.54
CSB-PGBD3P0DP91 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
CSB-PGBD3P0DP91 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC30.91■■■□□ 2.54
CSB-PGBD3P0DP91 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC30.91■■■□□ 2.54
CSB-PGBD3P0DP91 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
CSB-PGBD3P0DP91 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC30.91■■■□□ 2.54
CSB-PGBD3P0DP91 SERBP1P1-201ENST00000396021 1160 ntBASIC30.91■■■□□ 2.54
CSB-PGBD3P0DP91 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC30.91■■■□□ 2.54
CSB-PGBD3P0DP91 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC30.91■■■□□ 2.54
CSB-PGBD3P0DP91 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
CSB-PGBD3P0DP91 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC30.9■■■□□ 2.54
CSB-PGBD3P0DP91 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
CSB-PGBD3P0DP91 CA15P2-201ENST00000611168 834 ntBASIC30.9■■■□□ 2.54
CSB-PGBD3P0DP91 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
CSB-PGBD3P0DP91 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC30.89■■■□□ 2.54
CSB-PGBD3P0DP91 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC30.89■■■□□ 2.54
CSB-PGBD3P0DP91 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC30.89■■■□□ 2.54
CSB-PGBD3P0DP91 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC30.89■■■□□ 2.54
CSB-PGBD3P0DP91 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
CSB-PGBD3P0DP91 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC30.88■■■□□ 2.53
CSB-PGBD3P0DP91 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
CSB-PGBD3P0DP91 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
CSB-PGBD3P0DP91 AC097381.1-201ENST00000429019 1296 ntBASIC30.88■■■□□ 2.53
CSB-PGBD3P0DP91 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC30.88■■■□□ 2.53
CSB-PGBD3P0DP91 AC099791.2-201ENST00000605725 427 ntBASIC30.88■■■□□ 2.53
CSB-PGBD3P0DP91 AC087623.3-201ENST00000607047 1098 ntBASIC30.88■■■□□ 2.53
CSB-PGBD3P0DP91 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC30.88■■■□□ 2.53
CSB-PGBD3P0DP91 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC30.87■■■□□ 2.53
CSB-PGBD3P0DP91 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
CSB-PGBD3P0DP91 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC30.87■■■□□ 2.53
CSB-PGBD3P0DP91 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC30.87■■■□□ 2.53
CSB-PGBD3P0DP91 RASA4CP-201ENST00000424092 1398 ntBASIC30.87■■■□□ 2.53
CSB-PGBD3P0DP91 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC30.87■■■□□ 2.53
CSB-PGBD3P0DP91 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC30.86■■■□□ 2.53
CSB-PGBD3P0DP91 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC30.86■■■□□ 2.53
CSB-PGBD3P0DP91 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
CSB-PGBD3P0DP91 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
CSB-PGBD3P0DP91 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC30.86■■■□□ 2.53
CSB-PGBD3P0DP91 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
CSB-PGBD3P0DP91 AC010501.1-201ENST00000606270 1962 ntBASIC30.85■■■□□ 2.53
CSB-PGBD3P0DP91 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC30.85■■■□□ 2.53
CSB-PGBD3P0DP91 PTCHD3P2-201ENST00000424937 1205 ntBASIC30.85■■■□□ 2.53
CSB-PGBD3P0DP91 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC30.85■■■□□ 2.53
CSB-PGBD3P0DP91 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC30.85■■■□□ 2.53
CSB-PGBD3P0DP91 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
CSB-PGBD3P0DP91 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
CSB-PGBD3P0DP91 AC008764.7-201ENST00000593779 1081 ntBASIC30.84■■■□□ 2.53
CSB-PGBD3P0DP91 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC30.84■■■□□ 2.53
CSB-PGBD3P0DP91 PKM-203ENST00000389093 2279 ntTSL 5 BASIC30.84■■■□□ 2.53
CSB-PGBD3P0DP91 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC30.83■■■□□ 2.53
CSB-PGBD3P0DP91 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC30.83■■■□□ 2.53
CSB-PGBD3P0DP91 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
CSB-PGBD3P0DP91 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC30.83■■■□□ 2.53
CSB-PGBD3P0DP91 AC027682.1-201ENST00000562846 899 ntBASIC30.83■■■□□ 2.53
CSB-PGBD3P0DP91 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC30.83■■■□□ 2.53
CSB-PGBD3P0DP91 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC30.83■■■□□ 2.53
CSB-PGBD3P0DP91 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC30.83■■■□□ 2.53
CSB-PGBD3P0DP91 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC30.83■■■□□ 2.53
CSB-PGBD3P0DP91 AL162430.1-201ENST00000480705 870 ntBASIC30.82■■■□□ 2.52
CSB-PGBD3P0DP91 PLD4-205ENST00000553861 667 ntTSL 2 BASIC30.82■■■□□ 2.52
CSB-PGBD3P0DP91 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
CSB-PGBD3P0DP91 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC30.81■■■□□ 2.52
CSB-PGBD3P0DP91 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC30.81■■■□□ 2.52
CSB-PGBD3P0DP91 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
CSB-PGBD3P0DP91 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
CSB-PGBD3P0DP91 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC30.81■■■□□ 2.52
CSB-PGBD3P0DP91 AC131274.2-201ENST00000580697 1507 ntBASIC30.8■■■□□ 2.52
CSB-PGBD3P0DP91 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
CSB-PGBD3P0DP91 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC30.8■■■□□ 2.52
CSB-PGBD3P0DP91 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC30.8■■■□□ 2.52
CSB-PGBD3P0DP91 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC30.79■■■□□ 2.52
CSB-PGBD3P0DP91 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC30.79■■■□□ 2.52
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms