Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.05■□□□□ 0.96
FREM3P0C091 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
FREM3P0C091 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.04■□□□□ 0.96
FREM3P0C091 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.04■□□□□ 0.96
FREM3P0C091 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.04■□□□□ 0.96
FREM3P0C091 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
FREM3P0C091 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.04■□□□□ 0.96
FREM3P0C091 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
FREM3P0C091 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
FREM3P0C091 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.04■□□□□ 0.96
FREM3P0C091 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.04■□□□□ 0.96
FREM3P0C091 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.04■□□□□ 0.96
FREM3P0C091 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
FREM3P0C091 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
FREM3P0C091 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.03■□□□□ 0.96
FREM3P0C091 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.03■□□□□ 0.96
FREM3P0C091 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
FREM3P0C091 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.03■□□□□ 0.96
FREM3P0C091 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.03■□□□□ 0.96
FREM3P0C091 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
FREM3P0C091 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
FREM3P0C091 TSPY9P-201ENST00000440215 945 ntBASIC21.02■□□□□ 0.96
FREM3P0C091 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
FREM3P0C091 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
FREM3P0C091 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.02■□□□□ 0.96
FREM3P0C091 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
FREM3P0C091 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.02■□□□□ 0.96
FREM3P0C091 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
FREM3P0C091 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
FREM3P0C091 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
FREM3P0C091 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.01■□□□□ 0.95
FREM3P0C091 MIR6724-1-201ENST00000616420 92 ntBASIC21.01■□□□□ 0.95
FREM3P0C091 MIR6724-2-201ENST00000616483 92 ntBASIC21.01■□□□□ 0.95
FREM3P0C091 MIR6724-4-201ENST00000617390 92 ntBASIC21.01■□□□□ 0.95
FREM3P0C091 MIR6724-3-201ENST00000622482 92 ntBASIC21.01■□□□□ 0.95
FREM3P0C091 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
FREM3P0C091 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
FREM3P0C091 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
FREM3P0C091 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
FREM3P0C091 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
FREM3P0C091 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.01■□□□□ 0.95
FREM3P0C091 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
FREM3P0C091 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
FREM3P0C091 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
FREM3P0C091 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
FREM3P0C091 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
FREM3P0C091 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
FREM3P0C091 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21■□□□□ 0.95
FREM3P0C091 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
FREM3P0C091 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21■□□□□ 0.95
FREM3P0C091 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21■□□□□ 0.95
FREM3P0C091 MTURN-203ENST00000409688 843 ntTSL 2 BASIC21■□□□□ 0.95
FREM3P0C091 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21■□□□□ 0.95
FREM3P0C091 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21■□□□□ 0.95
FREM3P0C091 MTDHP2-201ENST00000601468 714 ntBASIC21■□□□□ 0.95
FREM3P0C091 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
FREM3P0C091 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21■□□□□ 0.95
FREM3P0C091 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
FREM3P0C091 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.99■□□□□ 0.95
FREM3P0C091 TSPY11P-201ENST00000442607 1045 ntBASIC20.99■□□□□ 0.95
FREM3P0C091 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
FREM3P0C091 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.99■□□□□ 0.95
FREM3P0C091 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
FREM3P0C091 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
FREM3P0C091 AC131274.2-201ENST00000580697 1507 ntBASIC20.98■□□□□ 0.95
FREM3P0C091 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
FREM3P0C091 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
FREM3P0C091 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.98■□□□□ 0.95
FREM3P0C091 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
FREM3P0C091 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
FREM3P0C091 AC142381.3-201ENST00000568208 1670 ntBASIC20.98■□□□□ 0.95
FREM3P0C091 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
FREM3P0C091 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
FREM3P0C091 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
FREM3P0C091 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.98■□□□□ 0.95
FREM3P0C091 AC010997.5-201ENST00000609182 354 ntBASIC20.98■□□□□ 0.95
FREM3P0C091 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
FREM3P0C091 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
FREM3P0C091 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
FREM3P0C091 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
FREM3P0C091 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.97■□□□□ 0.95
FREM3P0C091 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
FREM3P0C091 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
FREM3P0C091 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.97■□□□□ 0.95
FREM3P0C091 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
FREM3P0C091 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
FREM3P0C091 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
FREM3P0C091 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
FREM3P0C091 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.96■□□□□ 0.95
FREM3P0C091 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
FREM3P0C091 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
FREM3P0C091 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
FREM3P0C091 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
FREM3P0C091 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
FREM3P0C091 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
FREM3P0C091 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.96■□□□□ 0.95
FREM3P0C091 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.96■□□□□ 0.95
FREM3P0C091 MIR4466-201ENST00000606121 54 ntBASIC20.96■□□□□ 0.95
FREM3P0C091 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
FREM3P0C091 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms