Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CYP3A4P08684 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CYP3A4P08684 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC26.22■■□□□ 1.79
CYP3A4P08684 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC26.22■■□□□ 1.79
CYP3A4P08684 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC26.22■■□□□ 1.79
CYP3A4P08684 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
CYP3A4P08684 MIR6722-201ENST00000617286 78 ntBASIC26.22■■□□□ 1.79
CYP3A4P08684 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC26.22■■□□□ 1.79
CYP3A4P08684 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CYP3A4P08684 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
CYP3A4P08684 KRT16P3-201ENST00000439127 1283 ntBASIC26.21■■□□□ 1.79
CYP3A4P08684 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC26.21■■□□□ 1.79
CYP3A4P08684 AC010997.5-201ENST00000609182 354 ntBASIC26.21■■□□□ 1.79
CYP3A4P08684 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC26.21■■□□□ 1.79
CYP3A4P08684 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC26.21■■□□□ 1.79
CYP3A4P08684 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC26.21■■□□□ 1.79
CYP3A4P08684 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC26.21■■□□□ 1.79
CYP3A4P08684 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.79
CYP3A4P08684 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC26.2■■□□□ 1.78
CYP3A4P08684 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.78
CYP3A4P08684 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CYP3A4P08684 STK32C-205ENST00000456004 607 ntTSL 2 BASIC26.2■■□□□ 1.78
CYP3A4P08684 GRAMD4P7-201ENST00000578182 1232 ntBASIC26.2■■□□□ 1.78
CYP3A4P08684 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC26.2■■□□□ 1.78
CYP3A4P08684 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC26.2■■□□□ 1.78
CYP3A4P08684 MTDHP2-201ENST00000601468 714 ntBASIC26.19■■□□□ 1.78
CYP3A4P08684 EXOG-217ENST00000630638 197 ntTSL 5 BASIC26.19■■□□□ 1.78
CYP3A4P08684 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
CYP3A4P08684 EED-207ENST00000528180 1745 ntTSL 5 BASIC26.19■■□□□ 1.78
CYP3A4P08684 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CYP3A4P08684 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
CYP3A4P08684 AL022069.1-201ENST00000568025 1636 ntBASIC26.18■■□□□ 1.78
CYP3A4P08684 LSM4-201ENST00000252816 986 ntTSL 2 BASIC26.18■■□□□ 1.78
CYP3A4P08684 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
CYP3A4P08684 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
CYP3A4P08684 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
CYP3A4P08684 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
CYP3A4P08684 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC26.18■■□□□ 1.78
CYP3A4P08684 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
CYP3A4P08684 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
CYP3A4P08684 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
CYP3A4P08684 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
CYP3A4P08684 CD37-213ENST00000598095 1598 ntTSL 2 BASIC26.17■■□□□ 1.78
CYP3A4P08684 AL161729.1-201ENST00000604104 1402 ntBASIC26.17■■□□□ 1.78
CYP3A4P08684 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
CYP3A4P08684 CLTA-206ENST00000466396 695 ntTSL 2 BASIC26.17■■□□□ 1.78
CYP3A4P08684 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CYP3A4P08684 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
CYP3A4P08684 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
CYP3A4P08684 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
CYP3A4P08684 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
CYP3A4P08684 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
CYP3A4P08684 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CYP3A4P08684 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC26.15■■□□□ 1.78
CYP3A4P08684 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CYP3A4P08684 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CYP3A4P08684 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC26.15■■□□□ 1.78
CYP3A4P08684 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC26.15■■□□□ 1.78
CYP3A4P08684 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
CYP3A4P08684 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC26.15■■□□□ 1.78
CYP3A4P08684 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
CYP3A4P08684 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
CYP3A4P08684 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
CYP3A4P08684 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
CYP3A4P08684 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC26.14■■□□□ 1.78
CYP3A4P08684 MIR6724-1-201ENST00000616420 92 ntBASIC26.14■■□□□ 1.78
CYP3A4P08684 MIR6724-2-201ENST00000616483 92 ntBASIC26.14■■□□□ 1.78
CYP3A4P08684 MIR6724-4-201ENST00000617390 92 ntBASIC26.14■■□□□ 1.78
CYP3A4P08684 MIR6724-3-201ENST00000622482 92 ntBASIC26.14■■□□□ 1.78
CYP3A4P08684 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC26.14■■□□□ 1.78
CYP3A4P08684 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
CYP3A4P08684 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
CYP3A4P08684 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
CYP3A4P08684 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
CYP3A4P08684 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC26.13■■□□□ 1.77
CYP3A4P08684 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC26.13■■□□□ 1.77
CYP3A4P08684 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
CYP3A4P08684 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CYP3A4P08684 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC26.13■■□□□ 1.77
CYP3A4P08684 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
CYP3A4P08684 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC26.13■■□□□ 1.77
CYP3A4P08684 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC26.13■■□□□ 1.77
CYP3A4P08684 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CYP3A4P08684 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC26.12■■□□□ 1.77
CYP3A4P08684 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC26.12■■□□□ 1.77
CYP3A4P08684 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
CYP3A4P08684 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC26.12■■□□□ 1.77
CYP3A4P08684 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CYP3A4P08684 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
CYP3A4P08684 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CYP3A4P08684 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
CYP3A4P08684 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC26.11■■□□□ 1.77
CYP3A4P08684 TMEM202-AS1-202ENST00000565181 2325 ntBASIC26.11■■□□□ 1.77
CYP3A4P08684 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC26.11■■□□□ 1.77
CYP3A4P08684 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CYP3A4P08684 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC26.11■■□□□ 1.77
CYP3A4P08684 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC26.11■■□□□ 1.77
CYP3A4P08684 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CYP3A4P08684 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
CYP3A4P08684 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms