Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.45■□□□□ 0.7
CD74P04233 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CD74P04233 AC092068.2-201ENST00000590491 1708 ntBASIC19.45■□□□□ 0.7
CD74P04233 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.44■□□□□ 0.7
CD74P04233 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CD74P04233 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CD74P04233 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CD74P04233 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CD74P04233 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CD74P04233 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CD74P04233 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CD74P04233 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.44■□□□□ 0.7
CD74P04233 LINC00526-201ENST00000581067 1875 ntBASIC19.43■□□□□ 0.7
CD74P04233 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.43■□□□□ 0.7
CD74P04233 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CD74P04233 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CD74P04233 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CD74P04233 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.43■□□□□ 0.7
CD74P04233 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.43■□□□□ 0.7
CD74P04233 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CD74P04233 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CD74P04233 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CD74P04233 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CD74P04233 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CD74P04233 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CD74P04233 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CD74P04233 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CD74P04233 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CD74P04233 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.42■□□□□ 0.7
CD74P04233 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CD74P04233 MIR3960-201ENST00000583311 91 ntBASIC19.42■□□□□ 0.7
CD74P04233 C1orf229-201ENST00000623686 2258 ntBASIC19.42■□□□□ 0.7
CD74P04233 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CD74P04233 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CD74P04233 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CD74P04233 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.42■□□□□ 0.7
CD74P04233 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
CD74P04233 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CD74P04233 AC127496.7-201ENST00000625110 1798 ntBASIC19.42■□□□□ 0.7
CD74P04233 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.41■□□□□ 0.7
CD74P04233 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC19.41■□□□□ 0.7
CD74P04233 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC19.41■□□□□ 0.7
CD74P04233 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CD74P04233 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CD74P04233 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CD74P04233 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
CD74P04233 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CD74P04233 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CD74P04233 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC19.4■□□□□ 0.7
CD74P04233 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CD74P04233 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CD74P04233 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC19.4■□□□□ 0.7
CD74P04233 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
CD74P04233 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CD74P04233 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CD74P04233 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CD74P04233 FOXO3B-201ENST00000395675 1928 ntBASIC19.39■□□□□ 0.7
CD74P04233 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CD74P04233 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CD74P04233 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.39■□□□□ 0.69
CD74P04233 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CD74P04233 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CD74P04233 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC19.39■□□□□ 0.69
CD74P04233 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CD74P04233 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CD74P04233 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CD74P04233 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CD74P04233 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.39■□□□□ 0.69
CD74P04233 AC137767.1-201ENST00000602918 1920 ntBASIC19.39■□□□□ 0.69
CD74P04233 GUSBP5-202ENST00000510805 1989 ntBASIC19.39■□□□□ 0.69
CD74P04233 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CD74P04233 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CD74P04233 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
CD74P04233 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CD74P04233 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CD74P04233 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CD74P04233 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CD74P04233 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CD74P04233 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
CD74P04233 ECEL1P1-201ENST00000373592 1742 ntBASIC19.38■□□□□ 0.69
CD74P04233 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CD74P04233 AL157400.5-201ENST00000507624 621 ntBASIC19.38■□□□□ 0.69
CD74P04233 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CD74P04233 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CD74P04233 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.37■□□□□ 0.69
CD74P04233 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CD74P04233 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CD74P04233 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CD74P04233 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CD74P04233 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.37■□□□□ 0.69
CD74P04233 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CD74P04233 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
CD74P04233 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CD74P04233 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CD74P04233 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CD74P04233 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CD74P04233 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CD74P04233 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CD74P04233 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CD74P04233 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms