Protein–RNA interactions for Protein: P01135

TGFA, Protransforming growth factor alpha, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFAP01135 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TGFAP01135 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
TGFAP01135 DUX4L19-201ENST00000557448 1267 ntBASIC19.06■□□□□ 0.64
TGFAP01135 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TGFAP01135 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
TGFAP01135 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TGFAP01135 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TGFAP01135 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TGFAP01135 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TGFAP01135 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
TGFAP01135 AC010501.1-201ENST00000606270 1962 ntBASIC19.05■□□□□ 0.64
TGFAP01135 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TGFAP01135 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.05■□□□□ 0.64
TGFAP01135 AC092666.2-201ENST00000613287 246 ntBASIC19.05■□□□□ 0.64
TGFAP01135 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.05■□□□□ 0.64
TGFAP01135 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TGFAP01135 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TGFAP01135 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
TGFAP01135 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
TGFAP01135 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC19.04■□□□□ 0.64
TGFAP01135 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC19.04■□□□□ 0.64
TGFAP01135 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
TGFAP01135 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TGFAP01135 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TGFAP01135 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TGFAP01135 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
TGFAP01135 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TGFAP01135 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TGFAP01135 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TGFAP01135 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
TGFAP01135 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TGFAP01135 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TGFAP01135 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TGFAP01135 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TGFAP01135 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TGFAP01135 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
TGFAP01135 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TGFAP01135 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.03■□□□□ 0.64
TGFAP01135 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.03■□□□□ 0.64
TGFAP01135 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.03■□□□□ 0.64
TGFAP01135 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
TGFAP01135 SYT6-210ENST00000641643 1587 ntBASIC19.02■□□□□ 0.64
TGFAP01135 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
TGFAP01135 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
TGFAP01135 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
TGFAP01135 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.02■□□□□ 0.64
TGFAP01135 AC092171.4-201ENST00000609130 632 ntBASIC19.02■□□□□ 0.64
TGFAP01135 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.02■□□□□ 0.64
TGFAP01135 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
TGFAP01135 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
TGFAP01135 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
TGFAP01135 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.02■□□□□ 0.64
TGFAP01135 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.02■□□□□ 0.64
TGFAP01135 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.01■□□□□ 0.63
TGFAP01135 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TGFAP01135 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.01■□□□□ 0.63
TGFAP01135 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TGFAP01135 AC105265.2-201ENST00000467189 838 ntBASIC19.01■□□□□ 0.63
TGFAP01135 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TGFAP01135 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TGFAP01135 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC19.01■□□□□ 0.63
TGFAP01135 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
TGFAP01135 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
TGFAP01135 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TGFAP01135 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC19■□□□□ 0.63
TGFAP01135 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TGFAP01135 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TGFAP01135 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19■□□□□ 0.63
TGFAP01135 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
TGFAP01135 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TGFAP01135 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19■□□□□ 0.63
TGFAP01135 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19■□□□□ 0.63
TGFAP01135 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19■□□□□ 0.63
TGFAP01135 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19■□□□□ 0.63
TGFAP01135 AF213884.3-201ENST00000563833 479 ntBASIC19■□□□□ 0.63
TGFAP01135 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19■□□□□ 0.63
TGFAP01135 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19■□□□□ 0.63
TGFAP01135 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19■□□□□ 0.63
TGFAP01135 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TGFAP01135 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TGFAP01135 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
TGFAP01135 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC18.99■□□□□ 0.63
TGFAP01135 AC026271.2-201ENST00000428091 497 ntBASIC18.99■□□□□ 0.63
TGFAP01135 AL136967.2-201ENST00000623968 743 ntBASIC18.99■□□□□ 0.63
TGFAP01135 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.99■□□□□ 0.63
TGFAP01135 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
TGFAP01135 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TGFAP01135 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
TGFAP01135 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
TGFAP01135 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
TGFAP01135 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TGFAP01135 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.98■□□□□ 0.63
TGFAP01135 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC18.98■□□□□ 0.63
TGFAP01135 MIR5787-201ENST00000611784 55 ntBASIC18.98■□□□□ 0.63
TGFAP01135 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC18.98■□□□□ 0.63
TGFAP01135 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TGFAP01135 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
TGFAP01135 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC18.97■□□□□ 0.63
TGFAP01135 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.97■□□□□ 0.63
TGFAP01135 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms