Protein–RNA interactions for Protein: O95833

CLIC3, Chloride intracellular channel protein 3, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3O95833 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CLIC3O95833 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.31■■□□□ 1
CLIC3O95833 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.31■■□□□ 1
CLIC3O95833 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.31■■□□□ 1
CLIC3O95833 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.31■■□□□ 1
CLIC3O95833 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.31■■□□□ 1
CLIC3O95833 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.31■■□□□ 1
CLIC3O95833 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC21.31■■□□□ 1
CLIC3O95833 BOD1-206ENST00000480951 814 ntTSL 2 BASIC21.31■■□□□ 1
CLIC3O95833 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC21.31■■□□□ 1
CLIC3O95833 AC044849.2-201ENST00000606596 710 ntBASIC21.31■■□□□ 1
CLIC3O95833 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.31■■□□□ 1
CLIC3O95833 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.31■■□□□ 1
CLIC3O95833 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.31■■□□□ 1
CLIC3O95833 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.31■■□□□ 1
CLIC3O95833 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CLIC3O95833 DUX4L29-201ENST00000425409 679 ntBASIC21.3■■□□□ 1
CLIC3O95833 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.3■■□□□ 1
CLIC3O95833 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CLIC3O95833 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC21.3■■□□□ 1
CLIC3O95833 LINC00526-201ENST00000581067 1875 ntBASIC21.3■■□□□ 1
CLIC3O95833 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.29■■□□□ 1
CLIC3O95833 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.29■■□□□ 1
CLIC3O95833 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.29■■□□□ 1
CLIC3O95833 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CLIC3O95833 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CLIC3O95833 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.29■■□□□ 1
CLIC3O95833 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.29■■□□□ 1
CLIC3O95833 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
CLIC3O95833 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLIC3O95833 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.28■■□□□ 1
CLIC3O95833 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
CLIC3O95833 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.28■■□□□ 1
CLIC3O95833 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.27■■□□□ 1
CLIC3O95833 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CLIC3O95833 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.27■■□□□ 1
CLIC3O95833 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CLIC3O95833 GUSBP5-202ENST00000510805 1989 ntBASIC21.27■■□□□ 1
CLIC3O95833 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
CLIC3O95833 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
CLIC3O95833 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.27■■□□□ 1
CLIC3O95833 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.27■■□□□ 1
CLIC3O95833 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CLIC3O95833 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.27■■□□□ 1
CLIC3O95833 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.27■■□□□ 1
CLIC3O95833 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
CLIC3O95833 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CLIC3O95833 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CLIC3O95833 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
CLIC3O95833 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
CLIC3O95833 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLIC3O95833 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
CLIC3O95833 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLIC3O95833 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLIC3O95833 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC21.26■□□□□ 0.99
CLIC3O95833 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.26■□□□□ 0.99
CLIC3O95833 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.26■□□□□ 0.99
CLIC3O95833 ANOS2P-203ENST00000472227 1816 ntBASIC21.26■□□□□ 0.99
CLIC3O95833 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CLIC3O95833 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLIC3O95833 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLIC3O95833 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.25■□□□□ 0.99
CLIC3O95833 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLIC3O95833 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.25■□□□□ 0.99
CLIC3O95833 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CLIC3O95833 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLIC3O95833 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CLIC3O95833 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.25■□□□□ 0.99
CLIC3O95833 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
CLIC3O95833 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLIC3O95833 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLIC3O95833 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLIC3O95833 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLIC3O95833 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CLIC3O95833 HLA-V-202ENST00000446817 847 ntBASIC21.25■□□□□ 0.99
CLIC3O95833 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.25■□□□□ 0.99
CLIC3O95833 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLIC3O95833 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CLIC3O95833 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.25■□□□□ 0.99
CLIC3O95833 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CLIC3O95833 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLIC3O95833 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLIC3O95833 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.24■□□□□ 0.99
CLIC3O95833 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CLIC3O95833 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CLIC3O95833 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.24■□□□□ 0.99
CLIC3O95833 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLIC3O95833 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.24■□□□□ 0.99
CLIC3O95833 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLIC3O95833 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLIC3O95833 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.24■□□□□ 0.99
CLIC3O95833 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
CLIC3O95833 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CLIC3O95833 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
CLIC3O95833 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
CLIC3O95833 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLIC3O95833 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLIC3O95833 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLIC3O95833 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.23■□□□□ 0.99
CLIC3O95833 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms