Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ALX3O95076 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.29■□□□□ 0.84
ALX3O95076 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ALX3O95076 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ALX3O95076 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ALX3O95076 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ALX3O95076 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ALX3O95076 AC022413.1-201ENST00000624602 984 ntBASIC20.28■□□□□ 0.84
ALX3O95076 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ALX3O95076 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.28■□□□□ 0.84
ALX3O95076 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.28■□□□□ 0.84
ALX3O95076 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ALX3O95076 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ALX3O95076 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ALX3O95076 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
ALX3O95076 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
ALX3O95076 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ALX3O95076 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ALX3O95076 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
ALX3O95076 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ALX3O95076 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ALX3O95076 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ALX3O95076 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.27■□□□□ 0.84
ALX3O95076 RNF165-205ENST00000588679 2904 ntBASIC20.27■□□□□ 0.84
ALX3O95076 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
ALX3O95076 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.27■□□□□ 0.84
ALX3O95076 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
ALX3O95076 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.27■□□□□ 0.83
ALX3O95076 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
ALX3O95076 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ALX3O95076 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
ALX3O95076 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
ALX3O95076 AC093536.1-201ENST00000569153 554 ntBASIC20.26■□□□□ 0.83
ALX3O95076 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ALX3O95076 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
ALX3O95076 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
ALX3O95076 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ALX3O95076 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ALX3O95076 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
ALX3O95076 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
ALX3O95076 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ALX3O95076 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ALX3O95076 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.25■□□□□ 0.83
ALX3O95076 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ALX3O95076 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.24■□□□□ 0.83
ALX3O95076 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.24■□□□□ 0.83
ALX3O95076 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
ALX3O95076 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ALX3O95076 AC007029.1-201ENST00000604183 313 ntBASIC20.24■□□□□ 0.83
ALX3O95076 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ALX3O95076 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ALX3O95076 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ALX3O95076 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ALX3O95076 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ALX3O95076 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.24■□□□□ 0.83
ALX3O95076 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.24■□□□□ 0.83
ALX3O95076 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
ALX3O95076 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
ALX3O95076 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ALX3O95076 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
ALX3O95076 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.23■□□□□ 0.83
ALX3O95076 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.23■□□□□ 0.83
ALX3O95076 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ALX3O95076 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.22■□□□□ 0.83
ALX3O95076 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ALX3O95076 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC20.22■□□□□ 0.83
ALX3O95076 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ALX3O95076 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
ALX3O95076 RAP2CP1-202ENST00000605179 643 ntBASIC20.22■□□□□ 0.83
ALX3O95076 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.22■□□□□ 0.83
ALX3O95076 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
ALX3O95076 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ALX3O95076 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ALX3O95076 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.21■□□□□ 0.83
ALX3O95076 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ALX3O95076 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.21■□□□□ 0.83
ALX3O95076 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ALX3O95076 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ALX3O95076 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ALX3O95076 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ALX3O95076 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ALX3O95076 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.2■□□□□ 0.82
ALX3O95076 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.2■□□□□ 0.82
ALX3O95076 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
ALX3O95076 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ALX3O95076 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ALX3O95076 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.2■□□□□ 0.82
ALX3O95076 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ALX3O95076 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ALX3O95076 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.2■□□□□ 0.82
ALX3O95076 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ALX3O95076 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ALX3O95076 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ALX3O95076 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ALX3O95076 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
ALX3O95076 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
ALX3O95076 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
ALX3O95076 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.19■□□□□ 0.82
ALX3O95076 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ALX3O95076 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms