Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 EDA-201ENST00000338901 1233 ntBASIC29.95■■■□□ 2.39
PTCD1O75127 HYI-206ENST00000372434 1025 ntTSL 5 BASIC29.95■■■□□ 2.39
PTCD1O75127 AL355001.2-201ENST00000620617 1191 ntBASIC29.95■■■□□ 2.39
PTCD1O75127 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC29.95■■■□□ 2.38
PTCD1O75127 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC29.94■■■□□ 2.38
PTCD1O75127 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC29.94■■■□□ 2.38
PTCD1O75127 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
PTCD1O75127 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC29.94■■■□□ 2.38
PTCD1O75127 AC005703.6-201ENST00000623265 1329 ntBASIC29.94■■■□□ 2.38
PTCD1O75127 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC29.93■■■□□ 2.38
PTCD1O75127 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
PTCD1O75127 AC026271.2-201ENST00000428091 497 ntBASIC29.93■■■□□ 2.38
PTCD1O75127 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
PTCD1O75127 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
PTCD1O75127 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
PTCD1O75127 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC29.93■■■□□ 2.38
PTCD1O75127 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC29.93■■■□□ 2.38
PTCD1O75127 AC092803.2-201ENST00000564287 1899 ntBASIC29.93■■■□□ 2.38
PTCD1O75127 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC29.93■■■□□ 2.38
PTCD1O75127 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC29.92■■■□□ 2.38
PTCD1O75127 LGR4-203ENST00000480977 492 ntTSL 2 BASIC29.92■■■□□ 2.38
PTCD1O75127 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC29.92■■■□□ 2.38
PTCD1O75127 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC29.92■■■□□ 2.38
PTCD1O75127 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC29.92■■■□□ 2.38
PTCD1O75127 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC29.92■■■□□ 2.38
PTCD1O75127 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
PTCD1O75127 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC29.91■■■□□ 2.38
PTCD1O75127 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
PTCD1O75127 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC29.9■■■□□ 2.38
PTCD1O75127 AL136967.2-201ENST00000623968 743 ntBASIC29.9■■■□□ 2.38
PTCD1O75127 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC29.9■■■□□ 2.38
PTCD1O75127 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC29.9■■■□□ 2.38
PTCD1O75127 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
PTCD1O75127 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC29.89■■■□□ 2.38
PTCD1O75127 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC29.89■■■□□ 2.38
PTCD1O75127 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC29.89■■■□□ 2.38
PTCD1O75127 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC29.88■■■□□ 2.37
PTCD1O75127 AF213884.3-201ENST00000563833 479 ntBASIC29.88■■■□□ 2.37
PTCD1O75127 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC29.88■■■□□ 2.37
PTCD1O75127 AC092666.2-201ENST00000613287 246 ntBASIC29.88■■■□□ 2.37
PTCD1O75127 GRAMD4P4-201ENST00000613563 1115 ntBASIC29.88■■■□□ 2.37
PTCD1O75127 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
PTCD1O75127 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC29.87■■■□□ 2.37
PTCD1O75127 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC29.87■■■□□ 2.37
PTCD1O75127 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
PTCD1O75127 AC105265.2-201ENST00000467189 838 ntBASIC29.87■■■□□ 2.37
PTCD1O75127 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC29.86■■■□□ 2.37
PTCD1O75127 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
PTCD1O75127 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
PTCD1O75127 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
PTCD1O75127 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC29.86■■■□□ 2.37
PTCD1O75127 REST-206ENST00000612429 1376 ntTSL 5 BASIC29.86■■■□□ 2.37
PTCD1O75127 REST-207ENST00000616975 1370 ntTSL 5 BASIC29.86■■■□□ 2.37
PTCD1O75127 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC29.86■■■□□ 2.37
PTCD1O75127 AC131274.2-201ENST00000580697 1507 ntBASIC29.86■■■□□ 2.37
PTCD1O75127 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC29.85■■■□□ 2.37
PTCD1O75127 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC29.85■■■□□ 2.37
PTCD1O75127 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
PTCD1O75127 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
PTCD1O75127 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
PTCD1O75127 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC29.85■■■□□ 2.37
PTCD1O75127 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
PTCD1O75127 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
PTCD1O75127 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
PTCD1O75127 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC29.84■■■□□ 2.37
PTCD1O75127 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC29.84■■■□□ 2.37
PTCD1O75127 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC29.84■■■□□ 2.37
PTCD1O75127 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
PTCD1O75127 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC29.84■■■□□ 2.37
PTCD1O75127 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC29.84■■■□□ 2.37
PTCD1O75127 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC29.84■■■□□ 2.37
PTCD1O75127 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC29.84■■■□□ 2.37
PTCD1O75127 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
PTCD1O75127 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
PTCD1O75127 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
PTCD1O75127 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
PTCD1O75127 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC29.83■■■□□ 2.37
PTCD1O75127 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
PTCD1O75127 SLC6A10P-202ENST00000431994 2058 ntBASIC29.83■■■□□ 2.37
PTCD1O75127 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC29.82■■■□□ 2.36
PTCD1O75127 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC29.82■■■□□ 2.36
PTCD1O75127 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
PTCD1O75127 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
PTCD1O75127 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC29.82■■■□□ 2.36
PTCD1O75127 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
PTCD1O75127 STOX2-205ENST00000513034 807 ntTSL 3 BASIC29.82■■■□□ 2.36
PTCD1O75127 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
PTCD1O75127 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC29.82■■■□□ 2.36
PTCD1O75127 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
PTCD1O75127 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC29.81■■■□□ 2.36
PTCD1O75127 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC29.81■■■□□ 2.36
PTCD1O75127 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC29.81■■■□□ 2.36
PTCD1O75127 MIR939-201ENST00000401314 82 ntBASIC29.81■■■□□ 2.36
PTCD1O75127 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
PTCD1O75127 AP001330.3-201ENST00000520123 633 ntBASIC29.81■■■□□ 2.36
PTCD1O75127 DUX4L19-201ENST00000557448 1267 ntBASIC29.81■■■□□ 2.36
PTCD1O75127 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC29.8■■■□□ 2.36
PTCD1O75127 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC29.8■■■□□ 2.36
PTCD1O75127 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC29.8■■■□□ 2.36
PTCD1O75127 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC29.8■■■□□ 2.36
Retrieved 100 of 98,524 protein–RNA pairs in 10.2 ms