Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CXCL13O43927 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.72■□□□□ 0.91
CXCL13O43927 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CXCL13O43927 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.72■□□□□ 0.91
CXCL13O43927 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.72■□□□□ 0.91
CXCL13O43927 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
CXCL13O43927 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.71■□□□□ 0.91
CXCL13O43927 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CXCL13O43927 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CXCL13O43927 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
CXCL13O43927 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.71■□□□□ 0.91
CXCL13O43927 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.71■□□□□ 0.91
CXCL13O43927 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.71■□□□□ 0.91
CXCL13O43927 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CXCL13O43927 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CXCL13O43927 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.71■□□□□ 0.91
CXCL13O43927 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.7■□□□□ 0.91
CXCL13O43927 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CXCL13O43927 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CXCL13O43927 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CXCL13O43927 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CXCL13O43927 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
CXCL13O43927 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.7■□□□□ 0.9
CXCL13O43927 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.7■□□□□ 0.9
CXCL13O43927 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.7■□□□□ 0.9
CXCL13O43927 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CXCL13O43927 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CXCL13O43927 AL356441.2-201ENST00000443009 864 ntBASIC20.69■□□□□ 0.9
CXCL13O43927 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.69■□□□□ 0.9
CXCL13O43927 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.69■□□□□ 0.9
CXCL13O43927 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.69■□□□□ 0.9
CXCL13O43927 SNX5-217ENST00000606557 1087 ntBASIC20.69■□□□□ 0.9
CXCL13O43927 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
CXCL13O43927 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CXCL13O43927 AC135731.1-201ENST00000569415 2548 ntBASIC20.69■□□□□ 0.9
CXCL13O43927 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CXCL13O43927 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CXCL13O43927 KRT16P3-201ENST00000439127 1283 ntBASIC20.68■□□□□ 0.9
CXCL13O43927 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.68■□□□□ 0.9
CXCL13O43927 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.68■□□□□ 0.9
CXCL13O43927 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CXCL13O43927 MTDHP2-201ENST00000601468 714 ntBASIC20.68■□□□□ 0.9
CXCL13O43927 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.68■□□□□ 0.9
CXCL13O43927 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CXCL13O43927 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CXCL13O43927 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CXCL13O43927 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CXCL13O43927 AC131274.2-201ENST00000580697 1507 ntBASIC20.68■□□□□ 0.9
CXCL13O43927 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CXCL13O43927 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
CXCL13O43927 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CXCL13O43927 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CXCL13O43927 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.67■□□□□ 0.9
CXCL13O43927 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.67■□□□□ 0.9
CXCL13O43927 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.67■□□□□ 0.9
CXCL13O43927 AC010997.5-201ENST00000609182 354 ntBASIC20.67■□□□□ 0.9
CXCL13O43927 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CXCL13O43927 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CXCL13O43927 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.67■□□□□ 0.9
CXCL13O43927 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CXCL13O43927 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CXCL13O43927 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.67■□□□□ 0.9
CXCL13O43927 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.67■□□□□ 0.9
CXCL13O43927 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CXCL13O43927 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CXCL13O43927 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.66■□□□□ 0.9
CXCL13O43927 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.66■□□□□ 0.9
CXCL13O43927 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.66■□□□□ 0.9
CXCL13O43927 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.66■□□□□ 0.9
CXCL13O43927 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CXCL13O43927 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.66■□□□□ 0.9
CXCL13O43927 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CXCL13O43927 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CXCL13O43927 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CXCL13O43927 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CXCL13O43927 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CXCL13O43927 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CXCL13O43927 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.66■□□□□ 0.9
CXCL13O43927 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CXCL13O43927 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CXCL13O43927 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.65■□□□□ 0.9
CXCL13O43927 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CXCL13O43927 AL022069.1-201ENST00000568025 1636 ntBASIC20.65■□□□□ 0.9
CXCL13O43927 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CXCL13O43927 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.65■□□□□ 0.9
CXCL13O43927 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.65■□□□□ 0.9
CXCL13O43927 AC004448.1-201ENST00000458332 883 ntBASIC20.65■□□□□ 0.9
CXCL13O43927 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CXCL13O43927 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.64■□□□□ 0.9
CXCL13O43927 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.64■□□□□ 0.9
CXCL13O43927 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.64■□□□□ 0.9
CXCL13O43927 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CXCL13O43927 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CXCL13O43927 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
CXCL13O43927 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
CXCL13O43927 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CXCL13O43927 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CXCL13O43927 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.62■□□□□ 0.89
CXCL13O43927 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CXCL13O43927 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms