Protein–RNA interactions for Protein: O15297

PPM1D, Protein phosphatase 1D, humanhuman

Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1DO15297 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC22.55■■□□□ 1.2
PPM1DO15297 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
PPM1DO15297 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PPM1DO15297 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC22.55■■□□□ 1.2
PPM1DO15297 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PPM1DO15297 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
PPM1DO15297 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PPM1DO15297 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PPM1DO15297 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC22.54■■□□□ 1.2
PPM1DO15297 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PPM1DO15297 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PPM1DO15297 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PPM1DO15297 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PPM1DO15297 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
PPM1DO15297 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
PPM1DO15297 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC22.54■■□□□ 1.2
PPM1DO15297 AC022211.4-201ENST00000625094 2161 ntBASIC22.54■■□□□ 1.2
PPM1DO15297 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
PPM1DO15297 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PPM1DO15297 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC22.54■■□□□ 1.2
PPM1DO15297 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PPM1DO15297 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PPM1DO15297 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC22.53■■□□□ 1.2
PPM1DO15297 AK3-203ENST00000447596 705 ntTSL 2 BASIC22.53■■□□□ 1.2
PPM1DO15297 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC22.53■■□□□ 1.2
PPM1DO15297 MIR6722-201ENST00000617286 78 ntBASIC22.53■■□□□ 1.2
PPM1DO15297 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PPM1DO15297 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC22.53■■□□□ 1.2
PPM1DO15297 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC22.53■■□□□ 1.2
PPM1DO15297 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PPM1DO15297 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PPM1DO15297 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC22.52■■□□□ 1.2
PPM1DO15297 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
PPM1DO15297 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC22.52■■□□□ 1.2
PPM1DO15297 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PPM1DO15297 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PPM1DO15297 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC22.52■■□□□ 1.2
PPM1DO15297 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PPM1DO15297 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PPM1DO15297 TFPT-201ENST00000391757 774 ntTSL 5 BASIC22.51■■□□□ 1.19
PPM1DO15297 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
PPM1DO15297 AL136116.3-201ENST00000402907 1138 ntBASIC22.51■■□□□ 1.19
PPM1DO15297 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
PPM1DO15297 AC019069.1-201ENST00000610008 1333 ntBASIC22.51■■□□□ 1.19
PPM1DO15297 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC22.5■■□□□ 1.19
PPM1DO15297 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PPM1DO15297 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC22.5■■□□□ 1.19
PPM1DO15297 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PPM1DO15297 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
PPM1DO15297 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PPM1DO15297 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
PPM1DO15297 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PPM1DO15297 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC22.5■■□□□ 1.19
PPM1DO15297 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC22.5■■□□□ 1.19
PPM1DO15297 QDPR-206ENST00000508623 601 ntTSL 3 BASIC22.5■■□□□ 1.19
PPM1DO15297 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC22.5■■□□□ 1.19
PPM1DO15297 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PPM1DO15297 MIR4466-201ENST00000606121 54 ntBASIC22.5■■□□□ 1.19
PPM1DO15297 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PPM1DO15297 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
PPM1DO15297 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
PPM1DO15297 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PPM1DO15297 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PPM1DO15297 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC22.5■■□□□ 1.19
PPM1DO15297 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PPM1DO15297 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PPM1DO15297 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC22.49■■□□□ 1.19
PPM1DO15297 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
PPM1DO15297 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC22.49■■□□□ 1.19
PPM1DO15297 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC22.49■■□□□ 1.19
PPM1DO15297 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC22.49■■□□□ 1.19
PPM1DO15297 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PPM1DO15297 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC22.49■■□□□ 1.19
PPM1DO15297 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PPM1DO15297 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC22.48■■□□□ 1.19
PPM1DO15297 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC22.48■■□□□ 1.19
PPM1DO15297 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PPM1DO15297 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC22.48■■□□□ 1.19
PPM1DO15297 AL512631.2-201ENST00000604634 923 ntBASIC22.48■■□□□ 1.19
PPM1DO15297 RASSF1-AS1-201ENST00000629828 790 ntBASIC22.48■■□□□ 1.19
PPM1DO15297 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
PPM1DO15297 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC22.48■■□□□ 1.19
PPM1DO15297 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PPM1DO15297 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
PPM1DO15297 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
PPM1DO15297 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
PPM1DO15297 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PPM1DO15297 MED17-227ENST00000640521 2047 ntTSL 5 BASIC22.47■■□□□ 1.19
PPM1DO15297 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PPM1DO15297 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC22.47■■□□□ 1.19
PPM1DO15297 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PPM1DO15297 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PPM1DO15297 AC004448.1-201ENST00000458332 883 ntBASIC22.47■■□□□ 1.19
PPM1DO15297 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
PPM1DO15297 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC22.47■■□□□ 1.19
PPM1DO15297 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PPM1DO15297 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
PPM1DO15297 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PPM1DO15297 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
PPM1DO15297 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC22.46■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms