Protein–RNA interactions for Protein: O15270

SPTLC2, Serine palmitoyltransferase 2, humanhuman

Predictions only

Length 562 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2O15270 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
SPTLC2O15270 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
SPTLC2O15270 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
SPTLC2O15270 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SPTLC2O15270 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
SPTLC2O15270 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC26.33■■□□□ 1.81
SPTLC2O15270 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
SPTLC2O15270 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SPTLC2O15270 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
SPTLC2O15270 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
SPTLC2O15270 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
SPTLC2O15270 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
SPTLC2O15270 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
SPTLC2O15270 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC26.32■■□□□ 1.8
SPTLC2O15270 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC26.32■■□□□ 1.8
SPTLC2O15270 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC26.32■■□□□ 1.8
SPTLC2O15270 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC26.32■■□□□ 1.8
SPTLC2O15270 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
SPTLC2O15270 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SPTLC2O15270 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
SPTLC2O15270 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SPTLC2O15270 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SPTLC2O15270 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
SPTLC2O15270 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC26.31■■□□□ 1.8
SPTLC2O15270 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
SPTLC2O15270 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SPTLC2O15270 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
SPTLC2O15270 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
SPTLC2O15270 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC26.3■■□□□ 1.8
SPTLC2O15270 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SPTLC2O15270 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
SPTLC2O15270 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SPTLC2O15270 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SPTLC2O15270 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SPTLC2O15270 DUSP8P5-201ENST00000422884 1815 ntBASIC26.3■■□□□ 1.8
SPTLC2O15270 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
SPTLC2O15270 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC26.29■■□□□ 1.8
SPTLC2O15270 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
SPTLC2O15270 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SPTLC2O15270 ABHD17AP5-201ENST00000580133 923 ntBASIC26.29■■□□□ 1.8
SPTLC2O15270 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
SPTLC2O15270 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
SPTLC2O15270 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SPTLC2O15270 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SPTLC2O15270 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
SPTLC2O15270 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC26.28■■□□□ 1.8
SPTLC2O15270 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC26.28■■□□□ 1.8
SPTLC2O15270 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
SPTLC2O15270 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
SPTLC2O15270 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SPTLC2O15270 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
SPTLC2O15270 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
SPTLC2O15270 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SPTLC2O15270 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
SPTLC2O15270 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC26.27■■□□□ 1.8
SPTLC2O15270 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SPTLC2O15270 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
SPTLC2O15270 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC26.27■■□□□ 1.8
SPTLC2O15270 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SPTLC2O15270 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
SPTLC2O15270 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
SPTLC2O15270 HYI-210ENST00000486909 905 ntTSL 5 BASIC26.26■■□□□ 1.79
SPTLC2O15270 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC26.26■■□□□ 1.79
SPTLC2O15270 NTF6A-201ENST00000591175 560 ntBASIC26.26■■□□□ 1.79
SPTLC2O15270 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
SPTLC2O15270 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC26.26■■□□□ 1.79
SPTLC2O15270 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
SPTLC2O15270 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SPTLC2O15270 AC133561.1-201ENST00000568600 2415 ntBASIC26.25■■□□□ 1.79
SPTLC2O15270 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
SPTLC2O15270 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
SPTLC2O15270 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC26.25■■□□□ 1.79
SPTLC2O15270 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
SPTLC2O15270 DUX4L18-201ENST00000553347 1267 ntBASIC26.25■■□□□ 1.79
SPTLC2O15270 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC26.25■■□□□ 1.79
SPTLC2O15270 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
SPTLC2O15270 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
SPTLC2O15270 CD37-213ENST00000598095 1598 ntTSL 2 BASIC26.24■■□□□ 1.79
SPTLC2O15270 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
SPTLC2O15270 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SPTLC2O15270 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC26.24■■□□□ 1.79
SPTLC2O15270 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC26.24■■□□□ 1.79
SPTLC2O15270 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SPTLC2O15270 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SPTLC2O15270 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
SPTLC2O15270 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SPTLC2O15270 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
SPTLC2O15270 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC26.24■■□□□ 1.79
SPTLC2O15270 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
SPTLC2O15270 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
SPTLC2O15270 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC26.24■■□□□ 1.79
SPTLC2O15270 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
SPTLC2O15270 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC26.24■■□□□ 1.79
SPTLC2O15270 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC26.24■■□□□ 1.79
SPTLC2O15270 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC26.23■■□□□ 1.79
SPTLC2O15270 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC26.23■■□□□ 1.79
SPTLC2O15270 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SPTLC2O15270 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC26.23■■□□□ 1.79
SPTLC2O15270 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
SPTLC2O15270 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC26.23■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms