Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
CHD2O14647 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
CHD2O14647 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
CHD2O14647 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC32.79■■■□□ 2.84
CHD2O14647 ASB1-202ENST00000409297 878 ntTSL 5 BASIC32.79■■■□□ 2.84
CHD2O14647 SP2-202ENST00000613139 908 ntTSL 5 BASIC32.79■■■□□ 2.84
CHD2O14647 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC32.79■■■□□ 2.84
CHD2O14647 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC32.79■■■□□ 2.84
CHD2O14647 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC32.79■■■□□ 2.84
CHD2O14647 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC32.79■■■□□ 2.84
CHD2O14647 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC32.79■■■□□ 2.84
CHD2O14647 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC32.79■■■□□ 2.84
CHD2O14647 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC32.78■■■□□ 2.84
CHD2O14647 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC32.78■■■□□ 2.84
CHD2O14647 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC32.78■■■□□ 2.84
CHD2O14647 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC32.78■■■□□ 2.84
CHD2O14647 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC32.77■■■□□ 2.84
CHD2O14647 AC131274.2-201ENST00000580697 1507 ntBASIC32.77■■■□□ 2.84
CHD2O14647 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
CHD2O14647 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC32.77■■■□□ 2.84
CHD2O14647 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC32.77■■■□□ 2.84
CHD2O14647 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC32.77■■■□□ 2.84
CHD2O14647 AC096887.2-201ENST00000623443 1957 ntBASIC32.77■■■□□ 2.84
CHD2O14647 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
CHD2O14647 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC32.77■■■□□ 2.84
CHD2O14647 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC32.77■■■□□ 2.84
CHD2O14647 AC136469.2-201ENST00000623944 1028 ntBASIC32.77■■■□□ 2.84
CHD2O14647 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.83
CHD2O14647 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC32.76■■■□□ 2.83
CHD2O14647 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.83
CHD2O14647 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC32.76■■■□□ 2.83
CHD2O14647 SHF-208ENST00000560734 1731 ntTSL 3 BASIC32.75■■■□□ 2.83
CHD2O14647 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC32.75■■■□□ 2.83
CHD2O14647 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC32.75■■■□□ 2.83
CHD2O14647 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC32.75■■■□□ 2.83
CHD2O14647 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC32.75■■■□□ 2.83
CHD2O14647 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC32.75■■■□□ 2.83
CHD2O14647 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC32.75■■■□□ 2.83
CHD2O14647 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC32.75■■■□□ 2.83
CHD2O14647 SNX3-202ENST00000349379 890 ntTSL 2 BASIC32.74■■■□□ 2.83
CHD2O14647 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
CHD2O14647 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC32.74■■■□□ 2.83
CHD2O14647 C17orf82-201ENST00000623772 1530 ntBASIC32.74■■■□□ 2.83
CHD2O14647 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC32.74■■■□□ 2.83
CHD2O14647 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC32.74■■■□□ 2.83
CHD2O14647 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
CHD2O14647 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
CHD2O14647 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
CHD2O14647 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
CHD2O14647 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
CHD2O14647 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC32.72■■■□□ 2.83
CHD2O14647 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC32.72■■■□□ 2.83
CHD2O14647 AC022517.1-201ENST00000592429 346 ntBASIC32.72■■■□□ 2.83
CHD2O14647 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC32.72■■■□□ 2.83
CHD2O14647 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC32.72■■■□□ 2.83
CHD2O14647 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC32.72■■■□□ 2.83
CHD2O14647 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC32.72■■■□□ 2.83
CHD2O14647 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC32.71■■■□□ 2.83
CHD2O14647 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
CHD2O14647 AK1-201ENST00000223836 736 ntTSL 3 BASIC32.71■■■□□ 2.83
CHD2O14647 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC32.7■■■□□ 2.83
CHD2O14647 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC32.7■■■□□ 2.83
CHD2O14647 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
CHD2O14647 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
CHD2O14647 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
CHD2O14647 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.82
CHD2O14647 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.82
CHD2O14647 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC32.7■■■□□ 2.82
CHD2O14647 DUX4L2-201ENST00000561772 1275 ntBASIC32.7■■■□□ 2.82
CHD2O14647 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC32.7■■■□□ 2.82
CHD2O14647 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC32.7■■■□□ 2.82
CHD2O14647 DUX4L6-201ENST00000626483 1275 ntBASIC32.7■■■□□ 2.82
CHD2O14647 DUX4L1-201ENST00000627662 1275 ntBASIC32.7■■■□□ 2.82
CHD2O14647 DUX4L8-201ENST00000629013 1275 ntBASIC32.7■■■□□ 2.82
CHD2O14647 DUX4L3-201ENST00000630187 1275 ntBASIC32.7■■■□□ 2.82
CHD2O14647 DUX4L7-201ENST00000630678 1275 ntBASIC32.7■■■□□ 2.82
CHD2O14647 DUX4L5-201ENST00000630834 1275 ntBASIC32.7■■■□□ 2.82
CHD2O14647 AC097639.1-201ENST00000565519 1891 ntBASIC32.69■■■□□ 2.82
CHD2O14647 AL137784.2-201ENST00000607332 1000 ntBASIC32.69■■■□□ 2.82
CHD2O14647 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
CHD2O14647 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
CHD2O14647 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC32.69■■■□□ 2.82
CHD2O14647 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC32.69■■■□□ 2.82
CHD2O14647 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC32.68■■■□□ 2.82
CHD2O14647 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
CHD2O14647 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
CHD2O14647 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC32.67■■■□□ 2.82
CHD2O14647 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC32.67■■■□□ 2.82
CHD2O14647 HES6-206ENST00000409574 738 ntTSL 2 BASIC32.67■■■□□ 2.82
CHD2O14647 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC32.67■■■□□ 2.82
CHD2O14647 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
CHD2O14647 AC139426.1-201ENST00000568218 2529 ntBASIC32.66■■■□□ 2.82
CHD2O14647 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC32.66■■■□□ 2.82
CHD2O14647 AC027612.3-201ENST00000413684 1047 ntBASIC32.66■■■□□ 2.82
CHD2O14647 AC006455.2-201ENST00000429931 906 ntBASIC32.66■■■□□ 2.82
CHD2O14647 DENND3-207ENST00000518347 850 ntTSL 2 BASIC32.66■■■□□ 2.82
CHD2O14647 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC32.66■■■□□ 2.82
CHD2O14647 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC32.66■■■□□ 2.82
CHD2O14647 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC32.66■■■□□ 2.82
CHD2O14647 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms