Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RBFOX3A6NFN3 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RBFOX3A6NFN3 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RBFOX3A6NFN3 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RBFOX3A6NFN3 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RBFOX3A6NFN3 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RBFOX3A6NFN3 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RBFOX3A6NFN3 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
RBFOX3A6NFN3 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
RBFOX3A6NFN3 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RBFOX3A6NFN3 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
RBFOX3A6NFN3 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RBFOX3A6NFN3 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RBFOX3A6NFN3 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RBFOX3A6NFN3 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RBFOX3A6NFN3 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
RBFOX3A6NFN3 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RBFOX3A6NFN3 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC18.22■□□□□ 0.51
RBFOX3A6NFN3 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
RBFOX3A6NFN3 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RBFOX3A6NFN3 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RBFOX3A6NFN3 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RBFOX3A6NFN3 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RBFOX3A6NFN3 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RBFOX3A6NFN3 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RBFOX3A6NFN3 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
RBFOX3A6NFN3 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RBFOX3A6NFN3 AL137060.1-201ENST00000618151 2648 ntBASIC18.21■□□□□ 0.51
RBFOX3A6NFN3 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RBFOX3A6NFN3 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC18.21■□□□□ 0.51
RBFOX3A6NFN3 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RBFOX3A6NFN3 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RBFOX3A6NFN3 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RBFOX3A6NFN3 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RBFOX3A6NFN3 MIR6090-201ENST00000622481 60 ntBASIC18.21■□□□□ 0.51
RBFOX3A6NFN3 DUSP8P3-201ENST00000399571 1760 ntBASIC18.21■□□□□ 0.51
RBFOX3A6NFN3 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RBFOX3A6NFN3 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
RBFOX3A6NFN3 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
RBFOX3A6NFN3 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
RBFOX3A6NFN3 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RBFOX3A6NFN3 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RBFOX3A6NFN3 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
RBFOX3A6NFN3 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RBFOX3A6NFN3 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.2■□□□□ 0.5
RBFOX3A6NFN3 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC18.2■□□□□ 0.5
RBFOX3A6NFN3 MIR762-201ENST00000390236 83 ntBASIC18.2■□□□□ 0.5
RBFOX3A6NFN3 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC18.2■□□□□ 0.5
RBFOX3A6NFN3 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC18.2■□□□□ 0.5
RBFOX3A6NFN3 MIR6089-201ENST00000616698 64 ntBASIC18.2■□□□□ 0.5
RBFOX3A6NFN3 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RBFOX3A6NFN3 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RBFOX3A6NFN3 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RBFOX3A6NFN3 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC18.2■□□□□ 0.5
RBFOX3A6NFN3 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RBFOX3A6NFN3 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RBFOX3A6NFN3 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RBFOX3A6NFN3 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RBFOX3A6NFN3 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC18.19■□□□□ 0.5
RBFOX3A6NFN3 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
RBFOX3A6NFN3 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
RBFOX3A6NFN3 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RBFOX3A6NFN3 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RBFOX3A6NFN3 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RBFOX3A6NFN3 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
RBFOX3A6NFN3 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.18■□□□□ 0.5
RBFOX3A6NFN3 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RBFOX3A6NFN3 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RBFOX3A6NFN3 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
RBFOX3A6NFN3 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC18.18■□□□□ 0.5
RBFOX3A6NFN3 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC18.18■□□□□ 0.5
RBFOX3A6NFN3 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RBFOX3A6NFN3 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RBFOX3A6NFN3 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
RBFOX3A6NFN3 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RBFOX3A6NFN3 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RBFOX3A6NFN3 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RBFOX3A6NFN3 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
RBFOX3A6NFN3 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
RBFOX3A6NFN3 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
RBFOX3A6NFN3 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC18.17■□□□□ 0.5
RBFOX3A6NFN3 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.17■□□□□ 0.5
RBFOX3A6NFN3 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RBFOX3A6NFN3 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.17■□□□□ 0.5
RBFOX3A6NFN3 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RBFOX3A6NFN3 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RBFOX3A6NFN3 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
RBFOX3A6NFN3 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.17■□□□□ 0.5
RBFOX3A6NFN3 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
RBFOX3A6NFN3 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
RBFOX3A6NFN3 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC18.16■□□□□ 0.5
RBFOX3A6NFN3 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.16■□□□□ 0.5
RBFOX3A6NFN3 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
RBFOX3A6NFN3 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RBFOX3A6NFN3 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
RBFOX3A6NFN3 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RBFOX3A6NFN3 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.16■□□□□ 0.5
RBFOX3A6NFN3 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RBFOX3A6NFN3 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RBFOX3A6NFN3 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms