Protein–RNA interactions for Protein: A1L4H1

SSC5D, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, humanhuman

Predictions only

Length 1,573 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5DA1L4H1 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
SSC5DA1L4H1 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC27.42■■□□□ 1.98
SSC5DA1L4H1 PLD4-205ENST00000553861 667 ntTSL 2 BASIC27.42■■□□□ 1.98
SSC5DA1L4H1 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
SSC5DA1L4H1 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC27.41■■□□□ 1.98
SSC5DA1L4H1 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC27.41■■□□□ 1.98
SSC5DA1L4H1 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC27.41■■□□□ 1.98
SSC5DA1L4H1 AC131274.2-201ENST00000580697 1507 ntBASIC27.4■■□□□ 1.98
SSC5DA1L4H1 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
SSC5DA1L4H1 PTCHD3P2-201ENST00000424937 1205 ntBASIC27.4■■□□□ 1.98
SSC5DA1L4H1 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
SSC5DA1L4H1 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
SSC5DA1L4H1 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
SSC5DA1L4H1 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
SSC5DA1L4H1 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC27.39■■□□□ 1.98
SSC5DA1L4H1 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC27.39■■□□□ 1.98
SSC5DA1L4H1 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC27.39■■□□□ 1.98
SSC5DA1L4H1 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
SSC5DA1L4H1 SYT6-210ENST00000641643 1587 ntBASIC27.39■■□□□ 1.98
SSC5DA1L4H1 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.97
SSC5DA1L4H1 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC27.38■■□□□ 1.97
SSC5DA1L4H1 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC27.38■■□□□ 1.97
SSC5DA1L4H1 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC27.38■■□□□ 1.97
SSC5DA1L4H1 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC27.38■■□□□ 1.97
SSC5DA1L4H1 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC27.38■■□□□ 1.97
SSC5DA1L4H1 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC27.38■■□□□ 1.97
SSC5DA1L4H1 RASA4CP-201ENST00000424092 1398 ntBASIC27.38■■□□□ 1.97
SSC5DA1L4H1 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
SSC5DA1L4H1 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
SSC5DA1L4H1 PARL-206ENST00000435888 1098 ntTSL 5 BASIC27.37■■□□□ 1.97
SSC5DA1L4H1 AC027682.1-201ENST00000562846 899 ntBASIC27.37■■□□□ 1.97
SSC5DA1L4H1 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC27.37■■□□□ 1.97
SSC5DA1L4H1 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
SSC5DA1L4H1 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
SSC5DA1L4H1 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
SSC5DA1L4H1 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC27.36■■□□□ 1.97
SSC5DA1L4H1 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC27.36■■□□□ 1.97
SSC5DA1L4H1 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC27.36■■□□□ 1.97
SSC5DA1L4H1 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
SSC5DA1L4H1 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
SSC5DA1L4H1 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
SSC5DA1L4H1 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
SSC5DA1L4H1 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
SSC5DA1L4H1 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
SSC5DA1L4H1 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
SSC5DA1L4H1 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
SSC5DA1L4H1 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
SSC5DA1L4H1 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC27.35■■□□□ 1.97
SSC5DA1L4H1 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
SSC5DA1L4H1 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
SSC5DA1L4H1 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
SSC5DA1L4H1 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
SSC5DA1L4H1 AC010501.1-201ENST00000606270 1962 ntBASIC27.33■■□□□ 1.97
SSC5DA1L4H1 SHF-206ENST00000560471 2499 ntTSL 5 BASIC27.33■■□□□ 1.97
SSC5DA1L4H1 AC011298.3-201ENST00000615796 283 ntBASIC27.33■■□□□ 1.97
SSC5DA1L4H1 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.96
SSC5DA1L4H1 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
SSC5DA1L4H1 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
SSC5DA1L4H1 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC27.32■■□□□ 1.96
SSC5DA1L4H1 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC27.32■■□□□ 1.96
SSC5DA1L4H1 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC27.32■■□□□ 1.96
SSC5DA1L4H1 AC099791.2-201ENST00000605725 427 ntBASIC27.32■■□□□ 1.96
SSC5DA1L4H1 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
SSC5DA1L4H1 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC27.32■■□□□ 1.96
SSC5DA1L4H1 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
SSC5DA1L4H1 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC27.31■■□□□ 1.96
SSC5DA1L4H1 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
SSC5DA1L4H1 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC27.31■■□□□ 1.96
SSC5DA1L4H1 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
SSC5DA1L4H1 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC27.31■■□□□ 1.96
SSC5DA1L4H1 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
SSC5DA1L4H1 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC27.3■■□□□ 1.96
SSC5DA1L4H1 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
SSC5DA1L4H1 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
SSC5DA1L4H1 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC27.3■■□□□ 1.96
SSC5DA1L4H1 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC27.3■■□□□ 1.96
SSC5DA1L4H1 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC27.3■■□□□ 1.96
SSC5DA1L4H1 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
SSC5DA1L4H1 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC27.29■■□□□ 1.96
SSC5DA1L4H1 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC27.29■■□□□ 1.96
SSC5DA1L4H1 AC092171.4-201ENST00000609130 632 ntBASIC27.29■■□□□ 1.96
SSC5DA1L4H1 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC27.29■■□□□ 1.96
SSC5DA1L4H1 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
SSC5DA1L4H1 REST-206ENST00000612429 1376 ntTSL 5 BASIC27.29■■□□□ 1.96
SSC5DA1L4H1 REST-207ENST00000616975 1370 ntTSL 5 BASIC27.29■■□□□ 1.96
SSC5DA1L4H1 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC27.28■■□□□ 1.96
SSC5DA1L4H1 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC27.28■■□□□ 1.96
SSC5DA1L4H1 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC27.28■■□□□ 1.96
SSC5DA1L4H1 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
SSC5DA1L4H1 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC27.28■■□□□ 1.96
SSC5DA1L4H1 AC099791.1-201ENST00000416440 715 ntBASIC27.27■■□□□ 1.96
SSC5DA1L4H1 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC27.27■■□□□ 1.96
SSC5DA1L4H1 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
SSC5DA1L4H1 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
SSC5DA1L4H1 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC27.27■■□□□ 1.96
SSC5DA1L4H1 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.96
SSC5DA1L4H1 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC27.26■■□□□ 1.96
SSC5DA1L4H1 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC27.26■■□□□ 1.96
SSC5DA1L4H1 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC27.26■■□□□ 1.96
SSC5DA1L4H1 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC27.26■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms