Protein–RNA interactions for Protein: A0A1B0GVQ3

LINC00854, Long intergenic non-protein coding RNA 854, humanhuman

Predictions only

Length 168 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00854A0A1B0GVQ3 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
LINC00854A0A1B0GVQ3 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC20.24■□□□□ 0.83
LINC00854A0A1B0GVQ3 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
LINC00854A0A1B0GVQ3 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LINC00854A0A1B0GVQ3 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.24■□□□□ 0.83
LINC00854A0A1B0GVQ3 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LINC00854A0A1B0GVQ3 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC20.24■□□□□ 0.83
LINC00854A0A1B0GVQ3 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC20.24■□□□□ 0.83
LINC00854A0A1B0GVQ3 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.24■□□□□ 0.83
LINC00854A0A1B0GVQ3 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LINC00854A0A1B0GVQ3 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LINC00854A0A1B0GVQ3 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LINC00854A0A1B0GVQ3 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LINC00854A0A1B0GVQ3 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.23■□□□□ 0.83
LINC00854A0A1B0GVQ3 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
LINC00854A0A1B0GVQ3 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.23■□□□□ 0.83
LINC00854A0A1B0GVQ3 SLC25A24-204ENST00000569674 2357 ntBASIC20.23■□□□□ 0.83
LINC00854A0A1B0GVQ3 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
LINC00854A0A1B0GVQ3 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LINC00854A0A1B0GVQ3 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.23■□□□□ 0.83
LINC00854A0A1B0GVQ3 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LINC00854A0A1B0GVQ3 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LINC00854A0A1B0GVQ3 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.23■□□□□ 0.83
LINC00854A0A1B0GVQ3 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LINC00854A0A1B0GVQ3 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
LINC00854A0A1B0GVQ3 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
LINC00854A0A1B0GVQ3 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.22■□□□□ 0.83
LINC00854A0A1B0GVQ3 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
LINC00854A0A1B0GVQ3 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LINC00854A0A1B0GVQ3 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.22■□□□□ 0.83
LINC00854A0A1B0GVQ3 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LINC00854A0A1B0GVQ3 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LINC00854A0A1B0GVQ3 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LINC00854A0A1B0GVQ3 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.22■□□□□ 0.83
LINC00854A0A1B0GVQ3 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LINC00854A0A1B0GVQ3 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
LINC00854A0A1B0GVQ3 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
LINC00854A0A1B0GVQ3 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LINC00854A0A1B0GVQ3 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC20.21■□□□□ 0.83
LINC00854A0A1B0GVQ3 MIR6090-201ENST00000622481 60 ntBASIC20.21■□□□□ 0.83
LINC00854A0A1B0GVQ3 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LINC00854A0A1B0GVQ3 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LINC00854A0A1B0GVQ3 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LINC00854A0A1B0GVQ3 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
LINC00854A0A1B0GVQ3 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.2■□□□□ 0.82
LINC00854A0A1B0GVQ3 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
LINC00854A0A1B0GVQ3 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.2■□□□□ 0.82
LINC00854A0A1B0GVQ3 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
LINC00854A0A1B0GVQ3 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
LINC00854A0A1B0GVQ3 AC108673.1-201ENST00000510422 1159 ntBASIC20.2■□□□□ 0.82
LINC00854A0A1B0GVQ3 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LINC00854A0A1B0GVQ3 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
LINC00854A0A1B0GVQ3 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LINC00854A0A1B0GVQ3 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.2■□□□□ 0.82
LINC00854A0A1B0GVQ3 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.2■□□□□ 0.82
LINC00854A0A1B0GVQ3 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LINC00854A0A1B0GVQ3 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LINC00854A0A1B0GVQ3 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LINC00854A0A1B0GVQ3 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
LINC00854A0A1B0GVQ3 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
LINC00854A0A1B0GVQ3 AL137060.1-201ENST00000618151 2648 ntBASIC20.19■□□□□ 0.82
LINC00854A0A1B0GVQ3 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LINC00854A0A1B0GVQ3 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LINC00854A0A1B0GVQ3 MIR762-201ENST00000390236 83 ntBASIC20.19■□□□□ 0.82
LINC00854A0A1B0GVQ3 CAHM-201ENST00000604200 896 ntBASIC20.19■□□□□ 0.82
LINC00854A0A1B0GVQ3 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
LINC00854A0A1B0GVQ3 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LINC00854A0A1B0GVQ3 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LINC00854A0A1B0GVQ3 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LINC00854A0A1B0GVQ3 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
LINC00854A0A1B0GVQ3 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
LINC00854A0A1B0GVQ3 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
LINC00854A0A1B0GVQ3 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
LINC00854A0A1B0GVQ3 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
LINC00854A0A1B0GVQ3 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LINC00854A0A1B0GVQ3 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LINC00854A0A1B0GVQ3 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LINC00854A0A1B0GVQ3 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LINC00854A0A1B0GVQ3 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.18■□□□□ 0.82
LINC00854A0A1B0GVQ3 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LINC00854A0A1B0GVQ3 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
LINC00854A0A1B0GVQ3 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LINC00854A0A1B0GVQ3 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LINC00854A0A1B0GVQ3 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC20.18■□□□□ 0.82
LINC00854A0A1B0GVQ3 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC20.18■□□□□ 0.82
LINC00854A0A1B0GVQ3 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LINC00854A0A1B0GVQ3 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LINC00854A0A1B0GVQ3 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LINC00854A0A1B0GVQ3 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.17■□□□□ 0.82
LINC00854A0A1B0GVQ3 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.17■□□□□ 0.82
LINC00854A0A1B0GVQ3 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
LINC00854A0A1B0GVQ3 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LINC00854A0A1B0GVQ3 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LINC00854A0A1B0GVQ3 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC20.17■□□□□ 0.82
LINC00854A0A1B0GVQ3 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LINC00854A0A1B0GVQ3 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LINC00854A0A1B0GVQ3 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
LINC00854A0A1B0GVQ3 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LINC00854A0A1B0GVQ3 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.17■□□□□ 0.82
LINC00854A0A1B0GVQ3 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms