Protein–RNA interactions for Protein: A0A0U1RRI6

CENPVL3, Centromere protein V-like 3, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPVL3A0A0U1RRI6 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18.79■□□□□ 0.6
CENPVL3A0A0U1RRI6 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CENPVL3A0A0U1RRI6 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CENPVL3A0A0U1RRI6 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC18.78■□□□□ 0.6
CENPVL3A0A0U1RRI6 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
CENPVL3A0A0U1RRI6 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CENPVL3A0A0U1RRI6 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC18.78■□□□□ 0.6
CENPVL3A0A0U1RRI6 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CENPVL3A0A0U1RRI6 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CENPVL3A0A0U1RRI6 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC18.78■□□□□ 0.6
CENPVL3A0A0U1RRI6 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC18.78■□□□□ 0.6
CENPVL3A0A0U1RRI6 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC18.78■□□□□ 0.6
CENPVL3A0A0U1RRI6 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC18.78■□□□□ 0.6
CENPVL3A0A0U1RRI6 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CENPVL3A0A0U1RRI6 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CENPVL3A0A0U1RRI6 AC131274.2-201ENST00000580697 1507 ntBASIC18.78■□□□□ 0.6
CENPVL3A0A0U1RRI6 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CENPVL3A0A0U1RRI6 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC18.78■□□□□ 0.6
CENPVL3A0A0U1RRI6 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CENPVL3A0A0U1RRI6 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC18.77■□□□□ 0.6
CENPVL3A0A0U1RRI6 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC18.77■□□□□ 0.6
CENPVL3A0A0U1RRI6 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CENPVL3A0A0U1RRI6 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC18.77■□□□□ 0.6
CENPVL3A0A0U1RRI6 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CENPVL3A0A0U1RRI6 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CENPVL3A0A0U1RRI6 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC18.77■□□□□ 0.6
CENPVL3A0A0U1RRI6 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC18.77■□□□□ 0.6
CENPVL3A0A0U1RRI6 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC18.77■□□□□ 0.6
CENPVL3A0A0U1RRI6 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CENPVL3A0A0U1RRI6 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CENPVL3A0A0U1RRI6 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CENPVL3A0A0U1RRI6 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CENPVL3A0A0U1RRI6 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CENPVL3A0A0U1RRI6 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CENPVL3A0A0U1RRI6 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CENPVL3A0A0U1RRI6 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CENPVL3A0A0U1RRI6 AL136116.3-201ENST00000402907 1138 ntBASIC18.76■□□□□ 0.59
CENPVL3A0A0U1RRI6 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CENPVL3A0A0U1RRI6 STK32C-205ENST00000456004 607 ntTSL 2 BASIC18.76■□□□□ 0.59
CENPVL3A0A0U1RRI6 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CENPVL3A0A0U1RRI6 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CENPVL3A0A0U1RRI6 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CENPVL3A0A0U1RRI6 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CENPVL3A0A0U1RRI6 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CENPVL3A0A0U1RRI6 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CENPVL3A0A0U1RRI6 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC18.75■□□□□ 0.59
CENPVL3A0A0U1RRI6 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CENPVL3A0A0U1RRI6 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CENPVL3A0A0U1RRI6 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CENPVL3A0A0U1RRI6 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CENPVL3A0A0U1RRI6 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CENPVL3A0A0U1RRI6 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC18.75■□□□□ 0.59
CENPVL3A0A0U1RRI6 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CENPVL3A0A0U1RRI6 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CENPVL3A0A0U1RRI6 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CENPVL3A0A0U1RRI6 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CENPVL3A0A0U1RRI6 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC18.75■□□□□ 0.59
CENPVL3A0A0U1RRI6 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CENPVL3A0A0U1RRI6 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CENPVL3A0A0U1RRI6 SHF-207ENST00000560540 2062 ntTSL 5 BASIC18.74■□□□□ 0.59
CENPVL3A0A0U1RRI6 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CENPVL3A0A0U1RRI6 MIR4466-201ENST00000606121 54 ntBASIC18.74■□□□□ 0.59
CENPVL3A0A0U1RRI6 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC18.74■□□□□ 0.59
CENPVL3A0A0U1RRI6 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC18.74■□□□□ 0.59
CENPVL3A0A0U1RRI6 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC18.74■□□□□ 0.59
CENPVL3A0A0U1RRI6 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CENPVL3A0A0U1RRI6 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CENPVL3A0A0U1RRI6 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
CENPVL3A0A0U1RRI6 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CENPVL3A0A0U1RRI6 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CENPVL3A0A0U1RRI6 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CENPVL3A0A0U1RRI6 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CENPVL3A0A0U1RRI6 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC18.73■□□□□ 0.59
CENPVL3A0A0U1RRI6 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
CENPVL3A0A0U1RRI6 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CENPVL3A0A0U1RRI6 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CENPVL3A0A0U1RRI6 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CENPVL3A0A0U1RRI6 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.73■□□□□ 0.59
CENPVL3A0A0U1RRI6 AL512631.2-201ENST00000604634 923 ntBASIC18.73■□□□□ 0.59
CENPVL3A0A0U1RRI6 AC022211.4-201ENST00000625094 2161 ntBASIC18.73■□□□□ 0.59
CENPVL3A0A0U1RRI6 AL022069.1-201ENST00000568025 1636 ntBASIC18.73■□□□□ 0.59
CENPVL3A0A0U1RRI6 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CENPVL3A0A0U1RRI6 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
CENPVL3A0A0U1RRI6 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC18.73■□□□□ 0.59
CENPVL3A0A0U1RRI6 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CENPVL3A0A0U1RRI6 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC18.73■□□□□ 0.59
CENPVL3A0A0U1RRI6 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CENPVL3A0A0U1RRI6 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CENPVL3A0A0U1RRI6 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CENPVL3A0A0U1RRI6 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC18.72■□□□□ 0.59
CENPVL3A0A0U1RRI6 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CENPVL3A0A0U1RRI6 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CENPVL3A0A0U1RRI6 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CENPVL3A0A0U1RRI6 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CENPVL3A0A0U1RRI6 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CENPVL3A0A0U1RRI6 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CENPVL3A0A0U1RRI6 RASSF1-AS1-201ENST00000629828 790 ntBASIC18.72■□□□□ 0.59
CENPVL3A0A0U1RRI6 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CENPVL3A0A0U1RRI6 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CENPVL3A0A0U1RRI6 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms