Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC29.88■■■□□ 2.37
LOC102724428A0A0B4J2F2 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC29.88■■■□□ 2.37
LOC102724428A0A0B4J2F2 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC29.88■■■□□ 2.37
LOC102724428A0A0B4J2F2 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC29.88■■■□□ 2.37
LOC102724428A0A0B4J2F2 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
LOC102724428A0A0B4J2F2 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
LOC102724428A0A0B4J2F2 AC092171.4-201ENST00000609130 632 ntBASIC29.87■■■□□ 2.37
LOC102724428A0A0B4J2F2 CA15P2-201ENST00000611168 834 ntBASIC29.87■■■□□ 2.37
LOC102724428A0A0B4J2F2 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
LOC102724428A0A0B4J2F2 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
LOC102724428A0A0B4J2F2 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
LOC102724428A0A0B4J2F2 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC29.86■■■□□ 2.37
LOC102724428A0A0B4J2F2 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC29.86■■■□□ 2.37
LOC102724428A0A0B4J2F2 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
LOC102724428A0A0B4J2F2 RASA4CP-201ENST00000424092 1398 ntBASIC29.86■■■□□ 2.37
LOC102724428A0A0B4J2F2 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
LOC102724428A0A0B4J2F2 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC29.85■■■□□ 2.37
LOC102724428A0A0B4J2F2 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC29.85■■■□□ 2.37
LOC102724428A0A0B4J2F2 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC29.85■■■□□ 2.37
LOC102724428A0A0B4J2F2 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
LOC102724428A0A0B4J2F2 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC29.85■■■□□ 2.37
LOC102724428A0A0B4J2F2 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC29.85■■■□□ 2.37
LOC102724428A0A0B4J2F2 REST-206ENST00000612429 1376 ntTSL 5 BASIC29.85■■■□□ 2.37
LOC102724428A0A0B4J2F2 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC29.85■■■□□ 2.37
LOC102724428A0A0B4J2F2 REST-207ENST00000616975 1370 ntTSL 5 BASIC29.85■■■□□ 2.37
LOC102724428A0A0B4J2F2 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC29.84■■■□□ 2.37
LOC102724428A0A0B4J2F2 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
LOC102724428A0A0B4J2F2 PLD4-205ENST00000553861 667 ntTSL 2 BASIC29.84■■■□□ 2.37
LOC102724428A0A0B4J2F2 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC29.84■■■□□ 2.37
LOC102724428A0A0B4J2F2 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
LOC102724428A0A0B4J2F2 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
LOC102724428A0A0B4J2F2 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC29.84■■■□□ 2.37
LOC102724428A0A0B4J2F2 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
LOC102724428A0A0B4J2F2 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC29.83■■■□□ 2.37
LOC102724428A0A0B4J2F2 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
LOC102724428A0A0B4J2F2 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
LOC102724428A0A0B4J2F2 AL162430.1-201ENST00000480705 870 ntBASIC29.83■■■□□ 2.37
LOC102724428A0A0B4J2F2 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
LOC102724428A0A0B4J2F2 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
LOC102724428A0A0B4J2F2 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC29.82■■■□□ 2.36
LOC102724428A0A0B4J2F2 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
LOC102724428A0A0B4J2F2 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
LOC102724428A0A0B4J2F2 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC29.82■■■□□ 2.36
LOC102724428A0A0B4J2F2 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC29.82■■■□□ 2.36
LOC102724428A0A0B4J2F2 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC29.82■■■□□ 2.36
LOC102724428A0A0B4J2F2 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC29.82■■■□□ 2.36
LOC102724428A0A0B4J2F2 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
LOC102724428A0A0B4J2F2 SHF-206ENST00000560471 2499 ntTSL 5 BASIC29.81■■■□□ 2.36
LOC102724428A0A0B4J2F2 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC29.81■■■□□ 2.36
LOC102724428A0A0B4J2F2 AC099791.2-201ENST00000605725 427 ntBASIC29.81■■■□□ 2.36
LOC102724428A0A0B4J2F2 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
LOC102724428A0A0B4J2F2 PTCHD3P2-201ENST00000424937 1205 ntBASIC29.8■■■□□ 2.36
LOC102724428A0A0B4J2F2 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
LOC102724428A0A0B4J2F2 AC027682.1-201ENST00000562846 899 ntBASIC29.79■■■□□ 2.36
LOC102724428A0A0B4J2F2 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC29.79■■■□□ 2.36
LOC102724428A0A0B4J2F2 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC29.79■■■□□ 2.36
LOC102724428A0A0B4J2F2 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
LOC102724428A0A0B4J2F2 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC29.79■■■□□ 2.36
LOC102724428A0A0B4J2F2 AC131274.2-201ENST00000580697 1507 ntBASIC29.78■■■□□ 2.36
LOC102724428A0A0B4J2F2 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
LOC102724428A0A0B4J2F2 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC29.78■■■□□ 2.36
LOC102724428A0A0B4J2F2 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
LOC102724428A0A0B4J2F2 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
LOC102724428A0A0B4J2F2 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
LOC102724428A0A0B4J2F2 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
LOC102724428A0A0B4J2F2 AC011298.3-201ENST00000615796 283 ntBASIC29.77■■■□□ 2.36
LOC102724428A0A0B4J2F2 AC010501.1-201ENST00000606270 1962 ntBASIC29.77■■■□□ 2.36
LOC102724428A0A0B4J2F2 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC29.77■■■□□ 2.36
LOC102724428A0A0B4J2F2 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC29.77■■■□□ 2.36
LOC102724428A0A0B4J2F2 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
LOC102724428A0A0B4J2F2 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC29.76■■■□□ 2.35
LOC102724428A0A0B4J2F2 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
LOC102724428A0A0B4J2F2 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC29.76■■■□□ 2.35
LOC102724428A0A0B4J2F2 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC29.76■■■□□ 2.35
LOC102724428A0A0B4J2F2 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC29.75■■■□□ 2.35
LOC102724428A0A0B4J2F2 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC29.75■■■□□ 2.35
LOC102724428A0A0B4J2F2 GLI3-203ENST00000437480 451 ntTSL 2 BASIC29.75■■■□□ 2.35
LOC102724428A0A0B4J2F2 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC29.75■■■□□ 2.35
LOC102724428A0A0B4J2F2 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC29.75■■■□□ 2.35
LOC102724428A0A0B4J2F2 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC29.75■■■□□ 2.35
LOC102724428A0A0B4J2F2 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC29.75■■■□□ 2.35
LOC102724428A0A0B4J2F2 AL138724.1-201ENST00000606771 1088 ntBASIC29.75■■■□□ 2.35
LOC102724428A0A0B4J2F2 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC29.75■■■□□ 2.35
LOC102724428A0A0B4J2F2 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
LOC102724428A0A0B4J2F2 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
LOC102724428A0A0B4J2F2 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC29.74■■■□□ 2.35
LOC102724428A0A0B4J2F2 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC29.74■■■□□ 2.35
LOC102724428A0A0B4J2F2 AC008764.7-201ENST00000593779 1081 ntBASIC29.74■■■□□ 2.35
LOC102724428A0A0B4J2F2 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
LOC102724428A0A0B4J2F2 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
LOC102724428A0A0B4J2F2 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC29.73■■■□□ 2.35
LOC102724428A0A0B4J2F2 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC29.73■■■□□ 2.35
LOC102724428A0A0B4J2F2 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC29.73■■■□□ 2.35
LOC102724428A0A0B4J2F2 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC29.73■■■□□ 2.35
LOC102724428A0A0B4J2F2 AC009102.2-201ENST00000606772 1639 ntBASIC29.72■■■□□ 2.35
LOC102724428A0A0B4J2F2 IRS3P-201ENST00000223076 1006 ntBASIC29.72■■■□□ 2.35
LOC102724428A0A0B4J2F2 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC29.72■■■□□ 2.35
LOC102724428A0A0B4J2F2 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
LOC102724428A0A0B4J2F2 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC29.72■■■□□ 2.35
LOC102724428A0A0B4J2F2 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC29.71■■■□□ 2.35
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms