Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC17.37■□□□□ 0.37
TRAV25A0A0B4J276 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV25A0A0B4J276 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC17.37■□□□□ 0.37
TRAV25A0A0B4J276 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV25A0A0B4J276 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
TRAV25A0A0B4J276 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC17.37■□□□□ 0.37
TRAV25A0A0B4J276 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC17.37■□□□□ 0.37
TRAV25A0A0B4J276 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC17.36■□□□□ 0.37
TRAV25A0A0B4J276 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV25A0A0B4J276 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV25A0A0B4J276 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV25A0A0B4J276 SENP5-202ENST00000419026 973 ntTSL 3 BASIC17.36■□□□□ 0.37
TRAV25A0A0B4J276 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC17.36■□□□□ 0.37
TRAV25A0A0B4J276 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
TRAV25A0A0B4J276 AC004448.1-201ENST00000458332 883 ntBASIC17.36■□□□□ 0.37
TRAV25A0A0B4J276 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC17.36■□□□□ 0.37
TRAV25A0A0B4J276 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC17.36■□□□□ 0.37
TRAV25A0A0B4J276 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
TRAV25A0A0B4J276 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV25A0A0B4J276 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC17.36■□□□□ 0.37
TRAV25A0A0B4J276 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV25A0A0B4J276 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV25A0A0B4J276 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV25A0A0B4J276 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV25A0A0B4J276 AC138932.3-201ENST00000567634 1902 ntBASIC17.35■□□□□ 0.37
TRAV25A0A0B4J276 CREM-229ENST00000474362 1030 ntTSL 2 BASIC17.35■□□□□ 0.37
TRAV25A0A0B4J276 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC17.35■□□□□ 0.37
TRAV25A0A0B4J276 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC17.35■□□□□ 0.37
TRAV25A0A0B4J276 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC17.35■□□□□ 0.37
TRAV25A0A0B4J276 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV25A0A0B4J276 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
TRAV25A0A0B4J276 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TRAV25A0A0B4J276 HLA-L-211ENST00000482052 1765 ntBASIC17.35■□□□□ 0.37
TRAV25A0A0B4J276 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC17.35■□□□□ 0.37
TRAV25A0A0B4J276 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
TRAV25A0A0B4J276 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC17.35■□□□□ 0.37
TRAV25A0A0B4J276 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV25A0A0B4J276 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC17.34■□□□□ 0.37
TRAV25A0A0B4J276 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV25A0A0B4J276 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV25A0A0B4J276 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC17.34■□□□□ 0.37
TRAV25A0A0B4J276 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC17.34■□□□□ 0.37
TRAV25A0A0B4J276 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC17.34■□□□□ 0.37
TRAV25A0A0B4J276 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC17.34■□□□□ 0.37
TRAV25A0A0B4J276 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV25A0A0B4J276 SNX5-217ENST00000606557 1087 ntBASIC17.34■□□□□ 0.37
TRAV25A0A0B4J276 MIR6722-201ENST00000617286 78 ntBASIC17.34■□□□□ 0.37
TRAV25A0A0B4J276 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV25A0A0B4J276 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TRAV25A0A0B4J276 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
TRAV25A0A0B4J276 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRAV25A0A0B4J276 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRAV25A0A0B4J276 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAV25A0A0B4J276 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRAV25A0A0B4J276 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC17.33■□□□□ 0.36
TRAV25A0A0B4J276 MTDHP2-201ENST00000601468 714 ntBASIC17.33■□□□□ 0.36
TRAV25A0A0B4J276 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC17.33■□□□□ 0.36
TRAV25A0A0B4J276 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAV25A0A0B4J276 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC17.33■□□□□ 0.36
TRAV25A0A0B4J276 CD37-213ENST00000598095 1598 ntTSL 2 BASIC17.32■□□□□ 0.36
TRAV25A0A0B4J276 AC141586.4-201ENST00000624558 1573 ntBASIC17.32■□□□□ 0.36
TRAV25A0A0B4J276 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC17.32■□□□□ 0.36
TRAV25A0A0B4J276 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV25A0A0B4J276 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
TRAV25A0A0B4J276 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC17.32■□□□□ 0.36
TRAV25A0A0B4J276 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV25A0A0B4J276 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV25A0A0B4J276 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TRAV25A0A0B4J276 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV25A0A0B4J276 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC17.32■□□□□ 0.36
TRAV25A0A0B4J276 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV25A0A0B4J276 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV25A0A0B4J276 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC17.31■□□□□ 0.36
TRAV25A0A0B4J276 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV25A0A0B4J276 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV25A0A0B4J276 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TRAV25A0A0B4J276 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV25A0A0B4J276 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV25A0A0B4J276 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
TRAV25A0A0B4J276 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV25A0A0B4J276 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC17.31■□□□□ 0.36
TRAV25A0A0B4J276 CLTA-210ENST00000540080 989 ntTSL 2 BASIC17.31■□□□□ 0.36
TRAV25A0A0B4J276 AC010997.5-201ENST00000609182 354 ntBASIC17.31■□□□□ 0.36
TRAV25A0A0B4J276 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC17.31■□□□□ 0.36
TRAV25A0A0B4J276 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV25A0A0B4J276 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV25A0A0B4J276 AC131274.2-201ENST00000580697 1507 ntBASIC17.31■□□□□ 0.36
TRAV25A0A0B4J276 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC17.31■□□□□ 0.36
TRAV25A0A0B4J276 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV25A0A0B4J276 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV25A0A0B4J276 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV25A0A0B4J276 TSPY9P-201ENST00000440215 945 ntBASIC17.3■□□□□ 0.36
TRAV25A0A0B4J276 TSPY11P-201ENST00000442607 1045 ntBASIC17.3■□□□□ 0.36
TRAV25A0A0B4J276 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC17.3■□□□□ 0.36
TRAV25A0A0B4J276 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC17.3■□□□□ 0.36
TRAV25A0A0B4J276 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV25A0A0B4J276 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV25A0A0B4J276 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC17.3■□□□□ 0.36
TRAV25A0A0B4J276 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV25A0A0B4J276 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms