Protein–RNA interactions for Protein: A0A075B6T7

TRAV6, T-cell receptor alpha variable 6 (Fragment), humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV6A0A075B6T7 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.76■□□□□ 0.75
TRAV6A0A075B6T7 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV6A0A075B6T7 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV6A0A075B6T7 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV6A0A075B6T7 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
TRAV6A0A075B6T7 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV6A0A075B6T7 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
TRAV6A0A075B6T7 AC005559.1-201ENST00000589661 871 ntBASIC19.75■□□□□ 0.75
TRAV6A0A075B6T7 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
TRAV6A0A075B6T7 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
TRAV6A0A075B6T7 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV6A0A075B6T7 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV6A0A075B6T7 AC127496.7-201ENST00000625110 1798 ntBASIC19.75■□□□□ 0.75
TRAV6A0A075B6T7 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV6A0A075B6T7 GUSBP5-202ENST00000510805 1989 ntBASIC19.74■□□□□ 0.75
TRAV6A0A075B6T7 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV6A0A075B6T7 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV6A0A075B6T7 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV6A0A075B6T7 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV6A0A075B6T7 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
TRAV6A0A075B6T7 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV6A0A075B6T7 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV6A0A075B6T7 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV6A0A075B6T7 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV6A0A075B6T7 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
TRAV6A0A075B6T7 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV6A0A075B6T7 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV6A0A075B6T7 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
TRAV6A0A075B6T7 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.73■□□□□ 0.75
TRAV6A0A075B6T7 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV6A0A075B6T7 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
TRAV6A0A075B6T7 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV6A0A075B6T7 RPS2-210ENST00000530225 765 ntTSL 2 BASIC19.73■□□□□ 0.75
TRAV6A0A075B6T7 SLC25A24-204ENST00000569674 2357 ntBASIC19.73■□□□□ 0.75
TRAV6A0A075B6T7 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV6A0A075B6T7 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
TRAV6A0A075B6T7 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.73■□□□□ 0.75
TRAV6A0A075B6T7 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.73■□□□□ 0.75
TRAV6A0A075B6T7 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
TRAV6A0A075B6T7 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV6A0A075B6T7 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC19.72■□□□□ 0.75
TRAV6A0A075B6T7 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.72■□□□□ 0.75
TRAV6A0A075B6T7 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC19.72■□□□□ 0.75
TRAV6A0A075B6T7 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.72■□□□□ 0.75
TRAV6A0A075B6T7 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.72■□□□□ 0.75
TRAV6A0A075B6T7 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
TRAV6A0A075B6T7 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV6A0A075B6T7 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV6A0A075B6T7 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV6A0A075B6T7 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV6A0A075B6T7 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV6A0A075B6T7 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV6A0A075B6T7 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
TRAV6A0A075B6T7 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
TRAV6A0A075B6T7 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV6A0A075B6T7 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV6A0A075B6T7 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV6A0A075B6T7 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
TRAV6A0A075B6T7 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV6A0A075B6T7 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV6A0A075B6T7 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV6A0A075B6T7 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV6A0A075B6T7 AL137060.1-201ENST00000618151 2648 ntBASIC19.71■□□□□ 0.75
TRAV6A0A075B6T7 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV6A0A075B6T7 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
TRAV6A0A075B6T7 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.71■□□□□ 0.75
TRAV6A0A075B6T7 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV6A0A075B6T7 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV6A0A075B6T7 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV6A0A075B6T7 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRAV6A0A075B6T7 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.7■□□□□ 0.74
TRAV6A0A075B6T7 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRAV6A0A075B6T7 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
TRAV6A0A075B6T7 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
TRAV6A0A075B6T7 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC19.7■□□□□ 0.74
TRAV6A0A075B6T7 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRAV6A0A075B6T7 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRAV6A0A075B6T7 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRAV6A0A075B6T7 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC19.7■□□□□ 0.74
TRAV6A0A075B6T7 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAV6A0A075B6T7 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRAV6A0A075B6T7 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.69■□□□□ 0.74
TRAV6A0A075B6T7 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAV6A0A075B6T7 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAV6A0A075B6T7 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC19.69■□□□□ 0.74
TRAV6A0A075B6T7 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRAV6A0A075B6T7 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
TRAV6A0A075B6T7 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAV6A0A075B6T7 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAV6A0A075B6T7 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAV6A0A075B6T7 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.68■□□□□ 0.74
TRAV6A0A075B6T7 AC136428.2-201ENST00000563187 214 ntBASIC19.68■□□□□ 0.74
TRAV6A0A075B6T7 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.68■□□□□ 0.74
TRAV6A0A075B6T7 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.68■□□□□ 0.74
TRAV6A0A075B6T7 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAV6A0A075B6T7 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRAV6A0A075B6T7 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.68■□□□□ 0.74
TRAV6A0A075B6T7 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAV6A0A075B6T7 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAV6A0A075B6T7 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms