Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC14.69□□□□□ -0.06
PCDHGA1Q9Y5H4 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGA1Q9Y5H4 AL161670.2-201ENST00000557650 1227 ntBASIC14.69□□□□□ -0.06
PCDHGA1Q9Y5H4 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC14.69□□□□□ -0.06
PCDHGA1Q9Y5H4 FGFR3P5-201ENST00000564496 886 ntBASIC14.69□□□□□ -0.06
PCDHGA1Q9Y5H4 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC14.69□□□□□ -0.06
PCDHGA1Q9Y5H4 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC14.69□□□□□ -0.06
PCDHGA1Q9Y5H4 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGA1Q9Y5H4 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC14.69□□□□□ -0.06
PCDHGA1Q9Y5H4 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.69□□□□□ -0.06
PCDHGA1Q9Y5H4 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGA1Q9Y5H4 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGA1Q9Y5H4 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGA1Q9Y5H4 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGA1Q9Y5H4 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGA1Q9Y5H4 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGA1Q9Y5H4 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.69□□□□□ -0.06
PCDHGA1Q9Y5H4 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGA1Q9Y5H4 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PCDHGA1Q9Y5H4 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.69□□□□□ -0.06
PCDHGA1Q9Y5H4 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
PCDHGA1Q9Y5H4 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.69□□□□□ -0.06
PCDHGA1Q9Y5H4 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGA1Q9Y5H4 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGA1Q9Y5H4 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGA1Q9Y5H4 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGA1Q9Y5H4 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGA1Q9Y5H4 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.68□□□□□ -0.06
PCDHGA1Q9Y5H4 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGA1Q9Y5H4 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGA1Q9Y5H4 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGA1Q9Y5H4 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC14.68□□□□□ -0.06
PCDHGA1Q9Y5H4 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.68□□□□□ -0.06
PCDHGA1Q9Y5H4 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.68□□□□□ -0.06
PCDHGA1Q9Y5H4 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGA1Q9Y5H4 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGA1Q9Y5H4 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
PCDHGA1Q9Y5H4 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
PCDHGA1Q9Y5H4 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.68□□□□□ -0.06
PCDHGA1Q9Y5H4 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGA1Q9Y5H4 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGA1Q9Y5H4 AL158070.2-201ENST00000623713 1621 ntBASIC14.68□□□□□ -0.06
PCDHGA1Q9Y5H4 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC14.68□□□□□ -0.06
PCDHGA1Q9Y5H4 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGA1Q9Y5H4 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGA1Q9Y5H4 IGF1-203ENST00000392904 761 ntTSL 5 BASIC14.68□□□□□ -0.06
PCDHGA1Q9Y5H4 AC104457.1-201ENST00000401024 814 ntBASIC14.68□□□□□ -0.06
PCDHGA1Q9Y5H4 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
PCDHGA1Q9Y5H4 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC14.68□□□□□ -0.06
PCDHGA1Q9Y5H4 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.68□□□□□ -0.06
PCDHGA1Q9Y5H4 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC14.68□□□□□ -0.06
PCDHGA1Q9Y5H4 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
PCDHGA1Q9Y5H4 TUBB8P8-201ENST00000458717 1058 ntBASIC14.68□□□□□ -0.06
PCDHGA1Q9Y5H4 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGA1Q9Y5H4 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGA1Q9Y5H4 AC100850.1-201ENST00000506768 649 ntBASIC14.68□□□□□ -0.06
PCDHGA1Q9Y5H4 AL391280.1-201ENST00000506969 1062 ntBASIC14.68□□□□□ -0.06
PCDHGA1Q9Y5H4 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC14.68□□□□□ -0.06
PCDHGA1Q9Y5H4 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC14.68□□□□□ -0.06
PCDHGA1Q9Y5H4 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC14.68□□□□□ -0.06
PCDHGA1Q9Y5H4 AC005730.2-201ENST00000564549 1184 ntBASIC14.68□□□□□ -0.06
PCDHGA1Q9Y5H4 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC14.68□□□□□ -0.06
PCDHGA1Q9Y5H4 MIR7845-201ENST00000618396 99 ntBASIC14.68□□□□□ -0.06
PCDHGA1Q9Y5H4 AC022748.3-201ENST00000621828 275 ntBASIC14.68□□□□□ -0.06
PCDHGA1Q9Y5H4 AC079336.7-201ENST00000623428 1078 ntBASIC14.68□□□□□ -0.06
PCDHGA1Q9Y5H4 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.68□□□□□ -0.06
PCDHGA1Q9Y5H4 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
PCDHGA1Q9Y5H4 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
PCDHGA1Q9Y5H4 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGA1Q9Y5H4 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGA1Q9Y5H4 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGA1Q9Y5H4 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGA1Q9Y5H4 KRT8P4-201ENST00000509735 1454 ntBASIC14.68□□□□□ -0.06
PCDHGA1Q9Y5H4 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGA1Q9Y5H4 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGA1Q9Y5H4 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDHGA1Q9Y5H4 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.67□□□□□ -0.06
PCDHGA1Q9Y5H4 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC14.67□□□□□ -0.06
PCDHGA1Q9Y5H4 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGA1Q9Y5H4 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGA1Q9Y5H4 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGA1Q9Y5H4 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGA1Q9Y5H4 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGA1Q9Y5H4 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGA1Q9Y5H4 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGA1Q9Y5H4 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGA1Q9Y5H4 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGA1Q9Y5H4 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
PCDHGA1Q9Y5H4 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGA1Q9Y5H4 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC14.67□□□□□ -0.06
PCDHGA1Q9Y5H4 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.67□□□□□ -0.06
PCDHGA1Q9Y5H4 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGA1Q9Y5H4 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC14.67□□□□□ -0.06
PCDHGA1Q9Y5H4 AC007274.2-201ENST00000421675 662 ntBASIC14.67□□□□□ -0.06
PCDHGA1Q9Y5H4 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PCDHGA1Q9Y5H4 EIF3FP3-201ENST00000434851 1086 ntBASIC14.67□□□□□ -0.06
PCDHGA1Q9Y5H4 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC14.67□□□□□ -0.06
PCDHGA1Q9Y5H4 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC14.67□□□□□ -0.06
PCDHGA1Q9Y5H4 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC14.67□□□□□ -0.06
PCDHGA1Q9Y5H4 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms