Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 UNC93B6-202ENST00000528242 690 ntBASIC12.91□□□□□ -0.34
KCNIP3Q9Y2W7 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC12.91□□□□□ -0.34
KCNIP3Q9Y2W7 AC012640.2-201ENST00000561606 901 ntBASIC12.91□□□□□ -0.34
KCNIP3Q9Y2W7 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
KCNIP3Q9Y2W7 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC12.91□□□□□ -0.34
KCNIP3Q9Y2W7 AC011467.4-201ENST00000594891 528 ntBASIC12.91□□□□□ -0.34
KCNIP3Q9Y2W7 MED16-214ENST00000617672 554 ntTSL 5 BASIC12.91□□□□□ -0.34
KCNIP3Q9Y2W7 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
KCNIP3Q9Y2W7 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC12.91□□□□□ -0.34
KCNIP3Q9Y2W7 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
KCNIP3Q9Y2W7 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
KCNIP3Q9Y2W7 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC12.91□□□□□ -0.34
KCNIP3Q9Y2W7 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC12.91□□□□□ -0.34
KCNIP3Q9Y2W7 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
KCNIP3Q9Y2W7 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
KCNIP3Q9Y2W7 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
KCNIP3Q9Y2W7 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC12.91□□□□□ -0.34
KCNIP3Q9Y2W7 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
KCNIP3Q9Y2W7 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC12.91□□□□□ -0.34
KCNIP3Q9Y2W7 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC12.91□□□□□ -0.34
KCNIP3Q9Y2W7 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
KCNIP3Q9Y2W7 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
KCNIP3Q9Y2W7 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
KCNIP3Q9Y2W7 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
KCNIP3Q9Y2W7 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
KCNIP3Q9Y2W7 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
KCNIP3Q9Y2W7 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
KCNIP3Q9Y2W7 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
KCNIP3Q9Y2W7 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
KCNIP3Q9Y2W7 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
KCNIP3Q9Y2W7 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC12.91□□□□□ -0.34
KCNIP3Q9Y2W7 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
KCNIP3Q9Y2W7 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC12.9□□□□□ -0.34
KCNIP3Q9Y2W7 AC027601.5-201ENST00000624065 2482 ntBASIC12.9□□□□□ -0.34
KCNIP3Q9Y2W7 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
KCNIP3Q9Y2W7 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC12.9□□□□□ -0.34
KCNIP3Q9Y2W7 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
KCNIP3Q9Y2W7 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC12.9□□□□□ -0.34
KCNIP3Q9Y2W7 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
KCNIP3Q9Y2W7 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
KCNIP3Q9Y2W7 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
KCNIP3Q9Y2W7 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC12.9□□□□□ -0.34
KCNIP3Q9Y2W7 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
KCNIP3Q9Y2W7 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
KCNIP3Q9Y2W7 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC12.9□□□□□ -0.34
KCNIP3Q9Y2W7 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
KCNIP3Q9Y2W7 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC12.9□□□□□ -0.34
KCNIP3Q9Y2W7 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC12.9□□□□□ -0.34
KCNIP3Q9Y2W7 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
KCNIP3Q9Y2W7 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
KCNIP3Q9Y2W7 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
KCNIP3Q9Y2W7 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
KCNIP3Q9Y2W7 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
KCNIP3Q9Y2W7 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC12.9□□□□□ -0.34
KCNIP3Q9Y2W7 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
KCNIP3Q9Y2W7 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC12.9□□□□□ -0.34
KCNIP3Q9Y2W7 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
KCNIP3Q9Y2W7 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
KCNIP3Q9Y2W7 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
KCNIP3Q9Y2W7 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
KCNIP3Q9Y2W7 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
KCNIP3Q9Y2W7 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC12.9□□□□□ -0.34
KCNIP3Q9Y2W7 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
KCNIP3Q9Y2W7 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC12.9□□□□□ -0.34
KCNIP3Q9Y2W7 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
KCNIP3Q9Y2W7 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC12.9□□□□□ -0.34
KCNIP3Q9Y2W7 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
KCNIP3Q9Y2W7 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC12.9□□□□□ -0.34
KCNIP3Q9Y2W7 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
KCNIP3Q9Y2W7 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC12.9□□□□□ -0.34
KCNIP3Q9Y2W7 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC12.9□□□□□ -0.34
KCNIP3Q9Y2W7 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
KCNIP3Q9Y2W7 AC026979.3-201ENST00000607315 403 ntBASIC12.9□□□□□ -0.34
KCNIP3Q9Y2W7 AL031008.1-201ENST00000619963 541 ntBASIC12.9□□□□□ -0.34
KCNIP3Q9Y2W7 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
KCNIP3Q9Y2W7 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
KCNIP3Q9Y2W7 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC12.9□□□□□ -0.34
KCNIP3Q9Y2W7 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
KCNIP3Q9Y2W7 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
KCNIP3Q9Y2W7 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
KCNIP3Q9Y2W7 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC12.9□□□□□ -0.34
KCNIP3Q9Y2W7 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
KCNIP3Q9Y2W7 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
KCNIP3Q9Y2W7 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC12.9□□□□□ -0.34
KCNIP3Q9Y2W7 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
KCNIP3Q9Y2W7 AC136759.1-202ENST00000530858 2194 ntBASIC12.9□□□□□ -0.34
KCNIP3Q9Y2W7 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC12.9□□□□□ -0.34
KCNIP3Q9Y2W7 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
KCNIP3Q9Y2W7 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
KCNIP3Q9Y2W7 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC12.9□□□□□ -0.34
KCNIP3Q9Y2W7 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
KCNIP3Q9Y2W7 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
KCNIP3Q9Y2W7 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
KCNIP3Q9Y2W7 TKT-201ENST00000296289 1931 ntTSL 5 BASIC12.9□□□□□ -0.35
KCNIP3Q9Y2W7 OS9-207ENST00000439210 1946 ntTSL 2 BASIC12.9□□□□□ -0.35
KCNIP3Q9Y2W7 HSPA7-201ENST00000445535 1927 ntBASIC12.9□□□□□ -0.35
KCNIP3Q9Y2W7 AC113367.3-201ENST00000508316 1912 ntBASIC12.9□□□□□ -0.35
KCNIP3Q9Y2W7 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.35
KCNIP3Q9Y2W7 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
KCNIP3Q9Y2W7 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms