Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
POLR1DQ9Y2S0 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
POLR1DQ9Y2S0 AL139400.1-201ENST00000366220 510 ntBASIC13.78□□□□□ -0.2
POLR1DQ9Y2S0 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
POLR1DQ9Y2S0 CENPM-205ENST00000404067 905 ntTSL 3 BASIC13.78□□□□□ -0.2
POLR1DQ9Y2S0 CENPM-206ENST00000407253 818 ntTSL 2 BASIC13.78□□□□□ -0.2
POLR1DQ9Y2S0 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
POLR1DQ9Y2S0 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC13.78□□□□□ -0.2
POLR1DQ9Y2S0 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC13.78□□□□□ -0.2
POLR1DQ9Y2S0 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC13.78□□□□□ -0.2
POLR1DQ9Y2S0 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
POLR1DQ9Y2S0 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC13.78□□□□□ -0.2
POLR1DQ9Y2S0 TEX28P1-201ENST00000613479 1221 ntBASIC13.78□□□□□ -0.2
POLR1DQ9Y2S0 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
POLR1DQ9Y2S0 TEX28P2-201ENST00000617764 1221 ntBASIC13.78□□□□□ -0.2
POLR1DQ9Y2S0 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
POLR1DQ9Y2S0 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.78□□□□□ -0.2
POLR1DQ9Y2S0 AC093028.1-201ENST00000622998 982 ntBASIC13.78□□□□□ -0.2
POLR1DQ9Y2S0 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
POLR1DQ9Y2S0 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
POLR1DQ9Y2S0 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
POLR1DQ9Y2S0 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
POLR1DQ9Y2S0 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
POLR1DQ9Y2S0 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
POLR1DQ9Y2S0 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.78□□□□□ -0.2
POLR1DQ9Y2S0 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
POLR1DQ9Y2S0 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
POLR1DQ9Y2S0 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
POLR1DQ9Y2S0 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
POLR1DQ9Y2S0 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.78□□□□□ -0.2
POLR1DQ9Y2S0 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
POLR1DQ9Y2S0 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
POLR1DQ9Y2S0 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
POLR1DQ9Y2S0 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
POLR1DQ9Y2S0 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
POLR1DQ9Y2S0 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.78□□□□□ -0.2
POLR1DQ9Y2S0 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
POLR1DQ9Y2S0 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC13.77□□□□□ -0.2
POLR1DQ9Y2S0 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.77□□□□□ -0.2
POLR1DQ9Y2S0 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
POLR1DQ9Y2S0 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
POLR1DQ9Y2S0 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
POLR1DQ9Y2S0 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
POLR1DQ9Y2S0 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.2
POLR1DQ9Y2S0 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
POLR1DQ9Y2S0 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
POLR1DQ9Y2S0 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
POLR1DQ9Y2S0 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
POLR1DQ9Y2S0 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.77□□□□□ -0.21
POLR1DQ9Y2S0 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
POLR1DQ9Y2S0 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.77□□□□□ -0.21
POLR1DQ9Y2S0 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.77□□□□□ -0.21
POLR1DQ9Y2S0 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
POLR1DQ9Y2S0 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.77□□□□□ -0.21
POLR1DQ9Y2S0 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
POLR1DQ9Y2S0 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.77□□□□□ -0.21
POLR1DQ9Y2S0 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.77□□□□□ -0.21
POLR1DQ9Y2S0 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.77□□□□□ -0.21
POLR1DQ9Y2S0 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC13.77□□□□□ -0.21
POLR1DQ9Y2S0 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
POLR1DQ9Y2S0 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC13.77□□□□□ -0.21
POLR1DQ9Y2S0 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
POLR1DQ9Y2S0 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.77□□□□□ -0.21
POLR1DQ9Y2S0 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.77□□□□□ -0.21
POLR1DQ9Y2S0 AC027369.6-201ENST00000525520 931 ntBASIC13.77□□□□□ -0.21
POLR1DQ9Y2S0 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
POLR1DQ9Y2S0 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
POLR1DQ9Y2S0 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.77□□□□□ -0.21
POLR1DQ9Y2S0 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC13.77□□□□□ -0.21
POLR1DQ9Y2S0 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.77□□□□□ -0.21
POLR1DQ9Y2S0 AC025048.3-201ENST00000590609 569 ntBASIC13.77□□□□□ -0.21
POLR1DQ9Y2S0 WDR88-203ENST00000592765 651 ntTSL 5 BASIC13.77□□□□□ -0.21
POLR1DQ9Y2S0 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
POLR1DQ9Y2S0 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC13.77□□□□□ -0.21
POLR1DQ9Y2S0 AC074044.1-201ENST00000609673 707 ntBASIC13.77□□□□□ -0.21
POLR1DQ9Y2S0 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.77□□□□□ -0.21
POLR1DQ9Y2S0 AC005702.4-201ENST00000618393 416 ntBASIC13.77□□□□□ -0.21
POLR1DQ9Y2S0 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.77□□□□□ -0.21
POLR1DQ9Y2S0 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
POLR1DQ9Y2S0 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
POLR1DQ9Y2S0 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.77□□□□□ -0.21
POLR1DQ9Y2S0 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
POLR1DQ9Y2S0 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.77□□□□□ -0.21
POLR1DQ9Y2S0 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
POLR1DQ9Y2S0 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
POLR1DQ9Y2S0 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
POLR1DQ9Y2S0 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC13.77□□□□□ -0.21
POLR1DQ9Y2S0 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
POLR1DQ9Y2S0 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.76□□□□□ -0.21
POLR1DQ9Y2S0 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
POLR1DQ9Y2S0 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
POLR1DQ9Y2S0 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
POLR1DQ9Y2S0 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
POLR1DQ9Y2S0 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.76□□□□□ -0.21
POLR1DQ9Y2S0 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
POLR1DQ9Y2S0 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
POLR1DQ9Y2S0 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
POLR1DQ9Y2S0 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.76□□□□□ -0.21
POLR1DQ9Y2S0 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
POLR1DQ9Y2S0 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms