Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.12■□□□□ 0.01
SATB2Q9UPW6 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.12■□□□□ 0.01
SATB2Q9UPW6 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
SATB2Q9UPW6 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SATB2Q9UPW6 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC15.12■□□□□ 0.01
SATB2Q9UPW6 AC068587.10-201ENST00000641210 219 ntBASIC15.12■□□□□ 0.01
SATB2Q9UPW6 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SATB2Q9UPW6 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
SATB2Q9UPW6 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SATB2Q9UPW6 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SATB2Q9UPW6 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SATB2Q9UPW6 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
SATB2Q9UPW6 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SATB2Q9UPW6 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
SATB2Q9UPW6 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SATB2Q9UPW6 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SATB2Q9UPW6 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SATB2Q9UPW6 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SATB2Q9UPW6 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SATB2Q9UPW6 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SATB2Q9UPW6 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.12■□□□□ 0.01
SATB2Q9UPW6 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SATB2Q9UPW6 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
SATB2Q9UPW6 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SATB2Q9UPW6 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SATB2Q9UPW6 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SATB2Q9UPW6 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SATB2Q9UPW6 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC15.11■□□□□ 0.01
SATB2Q9UPW6 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
SATB2Q9UPW6 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.11■□□□□ 0.01
SATB2Q9UPW6 LINC02447-202ENST00000501888 2146 ntBASIC15.11■□□□□ 0.01
SATB2Q9UPW6 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SATB2Q9UPW6 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SATB2Q9UPW6 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SATB2Q9UPW6 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SATB2Q9UPW6 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
SATB2Q9UPW6 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SATB2Q9UPW6 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
SATB2Q9UPW6 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.11■□□□□ 0.01
SATB2Q9UPW6 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SATB2Q9UPW6 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SATB2Q9UPW6 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SATB2Q9UPW6 GZMB-202ENST00000382540 816 ntTSL 5 BASIC15.11■□□□□ 0.01
SATB2Q9UPW6 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.11■□□□□ 0.01
SATB2Q9UPW6 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SATB2Q9UPW6 AC007551.1-201ENST00000457394 519 ntBASIC15.11■□□□□ 0.01
SATB2Q9UPW6 RPL13AP25-201ENST00000484130 612 ntBASIC15.11■□□□□ 0.01
SATB2Q9UPW6 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SATB2Q9UPW6 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.11■□□□□ 0.01
SATB2Q9UPW6 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.11■□□□□ 0.01
SATB2Q9UPW6 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC15.11■□□□□ 0.01
SATB2Q9UPW6 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.11■□□□□ 0.01
SATB2Q9UPW6 AC124283.3-201ENST00000570869 594 ntBASIC15.11■□□□□ 0.01
SATB2Q9UPW6 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC15.11■□□□□ 0.01
SATB2Q9UPW6 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.11■□□□□ 0.01
SATB2Q9UPW6 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
SATB2Q9UPW6 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.11■□□□□ 0.01
SATB2Q9UPW6 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.11■□□□□ 0.01
SATB2Q9UPW6 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SATB2Q9UPW6 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SATB2Q9UPW6 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SATB2Q9UPW6 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.11■□□□□ 0.01
SATB2Q9UPW6 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
SATB2Q9UPW6 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SATB2Q9UPW6 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
SATB2Q9UPW6 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.11■□□□□ 0.01
SATB2Q9UPW6 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.11■□□□□ 0.01
SATB2Q9UPW6 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SATB2Q9UPW6 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SATB2Q9UPW6 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC15.11■□□□□ 0.01
SATB2Q9UPW6 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SATB2Q9UPW6 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.1■□□□□ 0.01
SATB2Q9UPW6 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SATB2Q9UPW6 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.1■□□□□ 0.01
SATB2Q9UPW6 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SATB2Q9UPW6 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
SATB2Q9UPW6 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
SATB2Q9UPW6 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SATB2Q9UPW6 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.1■□□□□ 0.01
SATB2Q9UPW6 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SATB2Q9UPW6 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SATB2Q9UPW6 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SATB2Q9UPW6 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SATB2Q9UPW6 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SATB2Q9UPW6 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC15.1■□□□□ 0.01
SATB2Q9UPW6 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.1■□□□□ 0.01
SATB2Q9UPW6 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SATB2Q9UPW6 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.1■□□□□ 0.01
SATB2Q9UPW6 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SATB2Q9UPW6 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC15.1■□□□□ 0.01
SATB2Q9UPW6 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC15.1■□□□□ 0.01
SATB2Q9UPW6 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SATB2Q9UPW6 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SATB2Q9UPW6 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
SATB2Q9UPW6 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SATB2Q9UPW6 AL009178.2-201ENST00000597278 2719 ntBASIC15.1■□□□□ 0.01
SATB2Q9UPW6 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
SATB2Q9UPW6 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
SATB2Q9UPW6 AC112504.1-201ENST00000623415 1841 ntBASIC15.1■□□□□ 0.01
SATB2Q9UPW6 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms