Protein–RNA interactions for Protein: Q9UBY8

CLN8, Protein CLN8, humanhuman

Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8Q9UBY8 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CLN8Q9UBY8 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLN8Q9UBY8 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CLN8Q9UBY8 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLN8Q9UBY8 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CLN8Q9UBY8 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CLN8Q9UBY8 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLN8Q9UBY8 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLN8Q9UBY8 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLN8Q9UBY8 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
CLN8Q9UBY8 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CLN8Q9UBY8 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
CLN8Q9UBY8 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLN8Q9UBY8 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLN8Q9UBY8 AC005034.1-201ENST00000426657 489 ntBASIC13.03□□□□□ -0.32
CLN8Q9UBY8 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC13.03□□□□□ -0.32
CLN8Q9UBY8 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLN8Q9UBY8 AC011495.1-201ENST00000498085 584 ntBASIC13.03□□□□□ -0.32
CLN8Q9UBY8 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC13.03□□□□□ -0.32
CLN8Q9UBY8 RBM7-207ENST00000544582 692 ntTSL 3 BASIC13.03□□□□□ -0.32
CLN8Q9UBY8 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC13.03□□□□□ -0.32
CLN8Q9UBY8 AL596325.1-201ENST00000563991 1082 ntBASIC13.03□□□□□ -0.32
CLN8Q9UBY8 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC13.03□□□□□ -0.32
CLN8Q9UBY8 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.03□□□□□ -0.32
CLN8Q9UBY8 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.03□□□□□ -0.32
CLN8Q9UBY8 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
CLN8Q9UBY8 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CLN8Q9UBY8 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLN8Q9UBY8 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLN8Q9UBY8 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CLN8Q9UBY8 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLN8Q9UBY8 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.03□□□□□ -0.32
CLN8Q9UBY8 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.03□□□□□ -0.32
CLN8Q9UBY8 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.03□□□□□ -0.32
CLN8Q9UBY8 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.03□□□□□ -0.32
CLN8Q9UBY8 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.03□□□□□ -0.32
CLN8Q9UBY8 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
CLN8Q9UBY8 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.03□□□□□ -0.32
CLN8Q9UBY8 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLN8Q9UBY8 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLN8Q9UBY8 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
CLN8Q9UBY8 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLN8Q9UBY8 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.03□□□□□ -0.32
CLN8Q9UBY8 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.03□□□□□ -0.32
CLN8Q9UBY8 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.03□□□□□ -0.32
CLN8Q9UBY8 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
CLN8Q9UBY8 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLN8Q9UBY8 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CLN8Q9UBY8 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CLN8Q9UBY8 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC13.03□□□□□ -0.32
CLN8Q9UBY8 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CLN8Q9UBY8 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.32
CLN8Q9UBY8 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.02□□□□□ -0.32
CLN8Q9UBY8 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
CLN8Q9UBY8 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC13.02□□□□□ -0.32
CLN8Q9UBY8 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CLN8Q9UBY8 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CLN8Q9UBY8 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CLN8Q9UBY8 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.02□□□□□ -0.32
CLN8Q9UBY8 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.02□□□□□ -0.32
CLN8Q9UBY8 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
CLN8Q9UBY8 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CLN8Q9UBY8 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.02□□□□□ -0.32
CLN8Q9UBY8 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CLN8Q9UBY8 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.02□□□□□ -0.33
CLN8Q9UBY8 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
CLN8Q9UBY8 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CLN8Q9UBY8 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CLN8Q9UBY8 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CLN8Q9UBY8 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
CLN8Q9UBY8 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
CLN8Q9UBY8 GRAP-202ENST00000395635 834 ntTSL 2 BASIC13.02□□□□□ -0.33
CLN8Q9UBY8 DGCR5-201ENST00000399539 862 ntBASIC13.02□□□□□ -0.33
CLN8Q9UBY8 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CLN8Q9UBY8 PTPA-220ENST00000436883 532 ntTSL 4 BASIC13.02□□□□□ -0.33
CLN8Q9UBY8 KRT17P7-201ENST00000451704 1104 ntBASIC13.02□□□□□ -0.33
CLN8Q9UBY8 RN7SL752P-201ENST00000463779 287 ntBASIC13.02□□□□□ -0.33
CLN8Q9UBY8 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.02□□□□□ -0.33
CLN8Q9UBY8 FAM86LP-201ENST00000478302 853 ntBASIC13.02□□□□□ -0.33
CLN8Q9UBY8 RPL13AP25-201ENST00000484130 612 ntBASIC13.02□□□□□ -0.33
CLN8Q9UBY8 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
CLN8Q9UBY8 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC13.02□□□□□ -0.33
CLN8Q9UBY8 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC13.02□□□□□ -0.33
CLN8Q9UBY8 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.02□□□□□ -0.33
CLN8Q9UBY8 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC13.02□□□□□ -0.33
CLN8Q9UBY8 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
CLN8Q9UBY8 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
CLN8Q9UBY8 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
CLN8Q9UBY8 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC13.02□□□□□ -0.33
CLN8Q9UBY8 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC13.02□□□□□ -0.33
CLN8Q9UBY8 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC13.02□□□□□ -0.33
CLN8Q9UBY8 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC13.02□□□□□ -0.33
CLN8Q9UBY8 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CLN8Q9UBY8 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.02□□□□□ -0.33
CLN8Q9UBY8 CU639417.3-201ENST00000624240 1404 ntBASIC13.02□□□□□ -0.33
CLN8Q9UBY8 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
CLN8Q9UBY8 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CLN8Q9UBY8 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CLN8Q9UBY8 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CLN8Q9UBY8 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms