Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HMG20BQ9P0W2 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC18.6■□□□□ 0.57
HMG20BQ9P0W2 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HMG20BQ9P0W2 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC18.6■□□□□ 0.57
HMG20BQ9P0W2 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HMG20BQ9P0W2 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC18.6■□□□□ 0.57
HMG20BQ9P0W2 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC18.6■□□□□ 0.57
HMG20BQ9P0W2 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HMG20BQ9P0W2 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
HMG20BQ9P0W2 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
HMG20BQ9P0W2 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HMG20BQ9P0W2 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
HMG20BQ9P0W2 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HMG20BQ9P0W2 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC18.59■□□□□ 0.57
HMG20BQ9P0W2 KRT8P14-201ENST00000414254 1442 ntBASIC18.59■□□□□ 0.57
HMG20BQ9P0W2 FOS-202ENST00000535987 1402 ntTSL 2 BASIC18.59■□□□□ 0.57
HMG20BQ9P0W2 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HMG20BQ9P0W2 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
HMG20BQ9P0W2 AC023024.2-201ENST00000623561 1993 ntBASIC18.59■□□□□ 0.57
HMG20BQ9P0W2 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HMG20BQ9P0W2 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HMG20BQ9P0W2 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
HMG20BQ9P0W2 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HMG20BQ9P0W2 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HMG20BQ9P0W2 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC18.59■□□□□ 0.57
HMG20BQ9P0W2 FER1L4-210ENST00000615531 5998 ntBASIC18.59■□□□□ 0.57
HMG20BQ9P0W2 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HMG20BQ9P0W2 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
HMG20BQ9P0W2 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HMG20BQ9P0W2 GUK1-206ENST00000366723 845 ntTSL 5 BASIC18.59■□□□□ 0.57
HMG20BQ9P0W2 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HMG20BQ9P0W2 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HMG20BQ9P0W2 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HMG20BQ9P0W2 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
HMG20BQ9P0W2 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
HMG20BQ9P0W2 B9D1-203ENST00000395615 805 ntTSL 3 BASIC18.59■□□□□ 0.57
HMG20BQ9P0W2 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
HMG20BQ9P0W2 LSM5-207ENST00000410044 687 ntTSL 3 BASIC18.59■□□□□ 0.57
HMG20BQ9P0W2 AL583810.1-201ENST00000553344 1045 ntBASIC18.59■□□□□ 0.57
HMG20BQ9P0W2 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC18.59■□□□□ 0.57
HMG20BQ9P0W2 ETV2-208ENST00000621247 941 ntTSL 5 BASIC18.59■□□□□ 0.57
HMG20BQ9P0W2 AC132938.4-201ENST00000623835 848 ntBASIC18.59■□□□□ 0.57
HMG20BQ9P0W2 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HMG20BQ9P0W2 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
HMG20BQ9P0W2 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
HMG20BQ9P0W2 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HMG20BQ9P0W2 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
HMG20BQ9P0W2 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HMG20BQ9P0W2 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
HMG20BQ9P0W2 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
HMG20BQ9P0W2 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HMG20BQ9P0W2 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC18.59■□□□□ 0.57
HMG20BQ9P0W2 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HMG20BQ9P0W2 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HMG20BQ9P0W2 PARN-202ENST00000420015 2360 ntTSL 2 BASIC18.59■□□□□ 0.57
HMG20BQ9P0W2 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HMG20BQ9P0W2 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
HMG20BQ9P0W2 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC18.58■□□□□ 0.57
HMG20BQ9P0W2 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC18.58■□□□□ 0.57
HMG20BQ9P0W2 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.57
HMG20BQ9P0W2 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HMG20BQ9P0W2 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HMG20BQ9P0W2 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC18.58■□□□□ 0.57
HMG20BQ9P0W2 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC18.58■□□□□ 0.57
HMG20BQ9P0W2 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HMG20BQ9P0W2 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HMG20BQ9P0W2 RPS15-201ENST00000233609 534 ntTSL 2 BASIC18.58■□□□□ 0.56
HMG20BQ9P0W2 AC006001.1-201ENST00000325130 474 ntBASIC18.58■□□□□ 0.56
HMG20BQ9P0W2 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
HMG20BQ9P0W2 HLA-K-203ENST00000430151 1046 ntBASIC18.58■□□□□ 0.56
HMG20BQ9P0W2 EIF3FP3-201ENST00000434851 1086 ntBASIC18.58■□□□□ 0.56
HMG20BQ9P0W2 AL590640.2-201ENST00000457038 527 ntBASIC18.58■□□□□ 0.56
HMG20BQ9P0W2 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC18.58■□□□□ 0.56
HMG20BQ9P0W2 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HMG20BQ9P0W2 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HMG20BQ9P0W2 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC18.58■□□□□ 0.56
HMG20BQ9P0W2 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC18.58■□□□□ 0.56
HMG20BQ9P0W2 RPS15-205ENST00000586686 562 ntTSL 5 BASIC18.58■□□□□ 0.56
HMG20BQ9P0W2 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC18.58■□□□□ 0.56
HMG20BQ9P0W2 RPS15-208ENST00000591804 711 ntTSL 5 BASIC18.58■□□□□ 0.56
HMG20BQ9P0W2 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
HMG20BQ9P0W2 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
HMG20BQ9P0W2 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
HMG20BQ9P0W2 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC18.58■□□□□ 0.56
HMG20BQ9P0W2 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HMG20BQ9P0W2 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HMG20BQ9P0W2 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
HMG20BQ9P0W2 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
HMG20BQ9P0W2 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HMG20BQ9P0W2 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HMG20BQ9P0W2 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HMG20BQ9P0W2 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
HMG20BQ9P0W2 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
HMG20BQ9P0W2 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC18.58■□□□□ 0.56
HMG20BQ9P0W2 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HMG20BQ9P0W2 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC18.57■□□□□ 0.56
HMG20BQ9P0W2 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HMG20BQ9P0W2 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HMG20BQ9P0W2 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HMG20BQ9P0W2 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms