Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRMT13Q9NUP7 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRMT13Q9NUP7 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TRMT13Q9NUP7 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRMT13Q9NUP7 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC16.66■□□□□ 0.26
TRMT13Q9NUP7 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRMT13Q9NUP7 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRMT13Q9NUP7 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC16.66■□□□□ 0.26
TRMT13Q9NUP7 AC253536.4-201ENST00000440539 267 ntBASIC16.66■□□□□ 0.26
TRMT13Q9NUP7 AL596276.2-201ENST00000447525 331 ntBASIC16.66■□□□□ 0.26
TRMT13Q9NUP7 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC16.66■□□□□ 0.26
TRMT13Q9NUP7 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC16.66■□□□□ 0.26
TRMT13Q9NUP7 AL161670.2-201ENST00000557650 1227 ntBASIC16.66■□□□□ 0.26
TRMT13Q9NUP7 SYT17-208ENST00000568433 812 ntTSL 3 BASIC16.66■□□□□ 0.26
TRMT13Q9NUP7 AC009955.4-201ENST00000597192 544 ntBASIC16.66■□□□□ 0.26
TRMT13Q9NUP7 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC16.66■□□□□ 0.26
TRMT13Q9NUP7 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC16.66■□□□□ 0.26
TRMT13Q9NUP7 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRMT13Q9NUP7 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRMT13Q9NUP7 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.66■□□□□ 0.26
TRMT13Q9NUP7 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRMT13Q9NUP7 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRMT13Q9NUP7 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRMT13Q9NUP7 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TRMT13Q9NUP7 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRMT13Q9NUP7 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRMT13Q9NUP7 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.66■□□□□ 0.26
TRMT13Q9NUP7 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
TRMT13Q9NUP7 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRMT13Q9NUP7 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRMT13Q9NUP7 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.65■□□□□ 0.26
TRMT13Q9NUP7 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRMT13Q9NUP7 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC16.65■□□□□ 0.26
TRMT13Q9NUP7 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.65■□□□□ 0.26
TRMT13Q9NUP7 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRMT13Q9NUP7 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.65■□□□□ 0.26
TRMT13Q9NUP7 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRMT13Q9NUP7 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRMT13Q9NUP7 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRMT13Q9NUP7 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.65■□□□□ 0.26
TRMT13Q9NUP7 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRMT13Q9NUP7 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRMT13Q9NUP7 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRMT13Q9NUP7 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC16.65■□□□□ 0.26
TRMT13Q9NUP7 UFM1-202ENST00000379649 846 ntTSL 4 BASIC16.65■□□□□ 0.26
TRMT13Q9NUP7 RN7SKP175-201ENST00000408472 289 ntBASIC16.65■□□□□ 0.26
TRMT13Q9NUP7 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRMT13Q9NUP7 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRMT13Q9NUP7 MARK2P5-201ENST00000507649 634 ntBASIC16.65■□□□□ 0.26
TRMT13Q9NUP7 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC16.65■□□□□ 0.26
TRMT13Q9NUP7 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC16.65■□□□□ 0.26
TRMT13Q9NUP7 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC16.65■□□□□ 0.26
TRMT13Q9NUP7 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC16.65■□□□□ 0.26
TRMT13Q9NUP7 AC100827.2-201ENST00000563214 1194 ntBASIC16.65■□□□□ 0.26
TRMT13Q9NUP7 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC16.65■□□□□ 0.26
TRMT13Q9NUP7 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC16.65■□□□□ 0.26
TRMT13Q9NUP7 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC16.65■□□□□ 0.26
TRMT13Q9NUP7 MIR7845-201ENST00000618396 99 ntBASIC16.65■□□□□ 0.26
TRMT13Q9NUP7 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC16.65■□□□□ 0.26
TRMT13Q9NUP7 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRMT13Q9NUP7 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRMT13Q9NUP7 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRMT13Q9NUP7 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRMT13Q9NUP7 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRMT13Q9NUP7 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRMT13Q9NUP7 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.65■□□□□ 0.26
TRMT13Q9NUP7 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRMT13Q9NUP7 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRMT13Q9NUP7 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRMT13Q9NUP7 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
TRMT13Q9NUP7 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRMT13Q9NUP7 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRMT13Q9NUP7 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
TRMT13Q9NUP7 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC16.65■□□□□ 0.26
TRMT13Q9NUP7 AL360270.3-201ENST00000609118 1348 ntBASIC16.65■□□□□ 0.26
TRMT13Q9NUP7 AC092978.1-202ENST00000637590 1327 ntBASIC16.65■□□□□ 0.26
TRMT13Q9NUP7 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TRMT13Q9NUP7 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRMT13Q9NUP7 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRMT13Q9NUP7 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TRMT13Q9NUP7 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.65■□□□□ 0.26
TRMT13Q9NUP7 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
TRMT13Q9NUP7 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
TRMT13Q9NUP7 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
TRMT13Q9NUP7 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TRMT13Q9NUP7 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.64■□□□□ 0.25
TRMT13Q9NUP7 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRMT13Q9NUP7 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRMT13Q9NUP7 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRMT13Q9NUP7 E2F3P2-201ENST00000447755 1422 ntBASIC16.64■□□□□ 0.25
TRMT13Q9NUP7 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.64■□□□□ 0.25
TRMT13Q9NUP7 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.64■□□□□ 0.25
TRMT13Q9NUP7 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRMT13Q9NUP7 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRMT13Q9NUP7 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRMT13Q9NUP7 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TRMT13Q9NUP7 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRMT13Q9NUP7 RPL5P21-201ENST00000404620 815 ntBASIC16.64■□□□□ 0.25
TRMT13Q9NUP7 PARVG-202ENST00000415224 999 ntTSL 2 BASIC16.64■□□□□ 0.25
TRMT13Q9NUP7 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms