Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 AL512384.1-201ENST00000406683 331 ntBASIC18.62■□□□□ 0.57
ECHDC1Q9NTX5 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC18.62■□□□□ 0.57
ECHDC1Q9NTX5 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC18.62■□□□□ 0.57
ECHDC1Q9NTX5 AC007389.4-201ENST00000454674 793 ntBASIC18.62■□□□□ 0.57
ECHDC1Q9NTX5 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC18.62■□□□□ 0.57
ECHDC1Q9NTX5 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
ECHDC1Q9NTX5 TDH-203ENST00000531764 1110 ntBASIC18.62■□□□□ 0.57
ECHDC1Q9NTX5 AC005225.4-201ENST00000557330 545 ntBASIC18.62■□□□□ 0.57
ECHDC1Q9NTX5 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC18.62■□□□□ 0.57
ECHDC1Q9NTX5 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC18.62■□□□□ 0.57
ECHDC1Q9NTX5 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC18.62■□□□□ 0.57
ECHDC1Q9NTX5 IGHV3-72-202ENST00000621503 303 ntBASIC18.62■□□□□ 0.57
ECHDC1Q9NTX5 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ECHDC1Q9NTX5 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC18.62■□□□□ 0.57
ECHDC1Q9NTX5 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ECHDC1Q9NTX5 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ECHDC1Q9NTX5 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ECHDC1Q9NTX5 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ECHDC1Q9NTX5 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ECHDC1Q9NTX5 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
ECHDC1Q9NTX5 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC18.62■□□□□ 0.57
ECHDC1Q9NTX5 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC18.62■□□□□ 0.57
ECHDC1Q9NTX5 FER1L4-210ENST00000615531 5998 ntBASIC18.62■□□□□ 0.57
ECHDC1Q9NTX5 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ECHDC1Q9NTX5 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ECHDC1Q9NTX5 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC18.62■□□□□ 0.57
ECHDC1Q9NTX5 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ECHDC1Q9NTX5 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ECHDC1Q9NTX5 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
ECHDC1Q9NTX5 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ECHDC1Q9NTX5 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
ECHDC1Q9NTX5 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ECHDC1Q9NTX5 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ECHDC1Q9NTX5 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ECHDC1Q9NTX5 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ECHDC1Q9NTX5 GPI-205ENST00000586425 1799 ntTSL 5 BASIC18.61■□□□□ 0.57
ECHDC1Q9NTX5 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC18.61■□□□□ 0.57
ECHDC1Q9NTX5 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC18.61■□□□□ 0.57
ECHDC1Q9NTX5 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ECHDC1Q9NTX5 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
ECHDC1Q9NTX5 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
ECHDC1Q9NTX5 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ECHDC1Q9NTX5 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC18.61■□□□□ 0.57
ECHDC1Q9NTX5 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC18.61■□□□□ 0.57
ECHDC1Q9NTX5 ACTBP8-201ENST00000403258 1108 ntBASIC18.61■□□□□ 0.57
ECHDC1Q9NTX5 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC18.61■□□□□ 0.57
ECHDC1Q9NTX5 BAATP1-201ENST00000412284 1225 ntBASIC18.61■□□□□ 0.57
ECHDC1Q9NTX5 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC18.61■□□□□ 0.57
ECHDC1Q9NTX5 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ECHDC1Q9NTX5 AC012441.1-201ENST00000446669 685 ntBASIC18.61■□□□□ 0.57
ECHDC1Q9NTX5 FUZ-207ENST00000526575 482 ntTSL 4 BASIC18.61■□□□□ 0.57
ECHDC1Q9NTX5 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
ECHDC1Q9NTX5 PTP4A1P2-201ENST00000546033 454 ntBASIC18.61■□□□□ 0.57
ECHDC1Q9NTX5 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC18.61■□□□□ 0.57
ECHDC1Q9NTX5 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ECHDC1Q9NTX5 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ECHDC1Q9NTX5 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
ECHDC1Q9NTX5 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC18.61■□□□□ 0.57
ECHDC1Q9NTX5 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ECHDC1Q9NTX5 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC18.61■□□□□ 0.57
ECHDC1Q9NTX5 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ECHDC1Q9NTX5 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ECHDC1Q9NTX5 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ECHDC1Q9NTX5 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
ECHDC1Q9NTX5 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ECHDC1Q9NTX5 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ECHDC1Q9NTX5 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ECHDC1Q9NTX5 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
ECHDC1Q9NTX5 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ECHDC1Q9NTX5 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ECHDC1Q9NTX5 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ECHDC1Q9NTX5 AC134312.5-201ENST00000568031 1313 ntBASIC18.6■□□□□ 0.57
ECHDC1Q9NTX5 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC18.6■□□□□ 0.57
ECHDC1Q9NTX5 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
ECHDC1Q9NTX5 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
ECHDC1Q9NTX5 EDF1-203ENST00000371649 790 ntTSL 2 BASIC18.6■□□□□ 0.57
ECHDC1Q9NTX5 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ECHDC1Q9NTX5 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
ECHDC1Q9NTX5 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC18.6■□□□□ 0.57
ECHDC1Q9NTX5 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC18.6■□□□□ 0.57
ECHDC1Q9NTX5 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC18.6■□□□□ 0.57
ECHDC1Q9NTX5 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC18.6■□□□□ 0.57
ECHDC1Q9NTX5 KRT18P25-201ENST00000508931 1278 ntBASIC18.6■□□□□ 0.57
ECHDC1Q9NTX5 AC068587.3-201ENST00000526613 355 ntBASIC18.6■□□□□ 0.57
ECHDC1Q9NTX5 DUX4L47-201ENST00000566374 394 ntBASIC18.6■□□□□ 0.57
ECHDC1Q9NTX5 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC18.6■□□□□ 0.57
ECHDC1Q9NTX5 AC012645.4-201ENST00000610691 1061 ntBASIC18.6■□□□□ 0.57
ECHDC1Q9NTX5 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ECHDC1Q9NTX5 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC18.6■□□□□ 0.57
ECHDC1Q9NTX5 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
ECHDC1Q9NTX5 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ECHDC1Q9NTX5 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC18.6■□□□□ 0.57
ECHDC1Q9NTX5 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ECHDC1Q9NTX5 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
ECHDC1Q9NTX5 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ECHDC1Q9NTX5 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ECHDC1Q9NTX5 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ECHDC1Q9NTX5 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC18.6■□□□□ 0.57
ECHDC1Q9NTX5 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
ECHDC1Q9NTX5 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms