Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 AC092135.3-201ENST00000624151 1846 ntBASIC18.33■□□□□ 0.53
RTN4Q9NQC3 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC18.33■□□□□ 0.53
RTN4Q9NQC3 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
RTN4Q9NQC3 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
RTN4Q9NQC3 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RTN4Q9NQC3 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RTN4Q9NQC3 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RTN4Q9NQC3 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC18.33■□□□□ 0.52
RTN4Q9NQC3 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RTN4Q9NQC3 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.33■□□□□ 0.52
RTN4Q9NQC3 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RTN4Q9NQC3 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RTN4Q9NQC3 MDH2-205ENST00000461263 648 ntTSL 2 BASIC18.33■□□□□ 0.52
RTN4Q9NQC3 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.33■□□□□ 0.52
RTN4Q9NQC3 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.33■□□□□ 0.52
RTN4Q9NQC3 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC18.33■□□□□ 0.52
RTN4Q9NQC3 AC069148.1-201ENST00000608741 768 ntBASIC18.33■□□□□ 0.52
RTN4Q9NQC3 AL589182.2-201ENST00000619332 1049 ntBASIC18.33■□□□□ 0.52
RTN4Q9NQC3 AC002044.3-201ENST00000623314 541 ntBASIC18.33■□□□□ 0.52
RTN4Q9NQC3 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.33■□□□□ 0.52
RTN4Q9NQC3 AC131212.3-201ENST00000624087 4219 ntBASIC18.33■□□□□ 0.52
RTN4Q9NQC3 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RTN4Q9NQC3 SLC22A20-204ENST00000530038 1673 ntBASIC18.33■□□□□ 0.52
RTN4Q9NQC3 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RTN4Q9NQC3 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
RTN4Q9NQC3 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
RTN4Q9NQC3 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC18.33■□□□□ 0.52
RTN4Q9NQC3 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
RTN4Q9NQC3 FAM102A-202ENST00000373084 3352 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RTN4Q9NQC3 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
RTN4Q9NQC3 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC18.33■□□□□ 0.52
RTN4Q9NQC3 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RTN4Q9NQC3 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC18.33■□□□□ 0.52
RTN4Q9NQC3 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
RTN4Q9NQC3 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
RTN4Q9NQC3 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RTN4Q9NQC3 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RTN4Q9NQC3 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RTN4Q9NQC3 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RTN4Q9NQC3 TSNAX-201ENST00000366639 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RTN4Q9NQC3 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC18.32■□□□□ 0.52
RTN4Q9NQC3 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RTN4Q9NQC3 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC18.32■□□□□ 0.52
RTN4Q9NQC3 EXOSC2-203ENST00000372352 1957 ntTSL 5 BASIC18.32■□□□□ 0.52
RTN4Q9NQC3 AC092919.2-201ENST00000623631 1645 ntBASIC18.32■□□□□ 0.52
RTN4Q9NQC3 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RTN4Q9NQC3 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RTN4Q9NQC3 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RTN4Q9NQC3 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
RTN4Q9NQC3 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
RTN4Q9NQC3 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
RTN4Q9NQC3 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.32■□□□□ 0.52
RTN4Q9NQC3 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RTN4Q9NQC3 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC18.32■□□□□ 0.52
RTN4Q9NQC3 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RTN4Q9NQC3 AC130686.1-201ENST00000622936 2466 ntBASIC18.32■□□□□ 0.52
RTN4Q9NQC3 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.32■□□□□ 0.52
RTN4Q9NQC3 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RTN4Q9NQC3 ITGA2B-201ENST00000262407 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RTN4Q9NQC3 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC18.32■□□□□ 0.52
RTN4Q9NQC3 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RTN4Q9NQC3 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RTN4Q9NQC3 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RTN4Q9NQC3 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
RTN4Q9NQC3 AC015712.2-201ENST00000560351 3688 ntTSL 2 BASIC18.31■□□□□ 0.52
RTN4Q9NQC3 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RTN4Q9NQC3 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTN4Q9NQC3 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC18.31■□□□□ 0.52
RTN4Q9NQC3 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC18.31■□□□□ 0.52
RTN4Q9NQC3 AC090616.6-203ENST00000579186 1945 ntBASIC18.31■□□□□ 0.52
RTN4Q9NQC3 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RTN4Q9NQC3 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RTN4Q9NQC3 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTN4Q9NQC3 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RTN4Q9NQC3 BX324167.2-201ENST00000623717 3316 ntBASIC18.31■□□□□ 0.52
RTN4Q9NQC3 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.31■□□□□ 0.52
RTN4Q9NQC3 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTN4Q9NQC3 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.31■□□□□ 0.52
RTN4Q9NQC3 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RTN4Q9NQC3 AL157385.1-201ENST00000446973 268 ntBASIC18.31■□□□□ 0.52
RTN4Q9NQC3 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.31■□□□□ 0.52
RTN4Q9NQC3 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RTN4Q9NQC3 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.31■□□□□ 0.52
RTN4Q9NQC3 AC109635.5-201ENST00000533593 962 ntBASIC18.31■□□□□ 0.52
RTN4Q9NQC3 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.31■□□□□ 0.52
RTN4Q9NQC3 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.31■□□□□ 0.52
RTN4Q9NQC3 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.31■□□□□ 0.52
RTN4Q9NQC3 AC138894.3-201ENST00000603787 634 ntBASIC18.31■□□□□ 0.52
RTN4Q9NQC3 AL139288.1-201ENST00000623748 933 ntBASIC18.31■□□□□ 0.52
RTN4Q9NQC3 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RTN4Q9NQC3 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTN4Q9NQC3 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RTN4Q9NQC3 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC18.31■□□□□ 0.52
RTN4Q9NQC3 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTN4Q9NQC3 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTN4Q9NQC3 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RTN4Q9NQC3 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTN4Q9NQC3 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC18.31■□□□□ 0.52
RTN4Q9NQC3 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RTN4Q9NQC3 MIR497HG-202ENST00000572453 3838 ntBASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms