Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
BRF2Q9HAW0 AL049840.4-201ENST00000602422 811 ntBASIC14.67□□□□□ -0.06
BRF2Q9HAW0 AC116165.1-201ENST00000611806 668 ntBASIC14.67□□□□□ -0.06
BRF2Q9HAW0 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
BRF2Q9HAW0 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
BRF2Q9HAW0 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
BRF2Q9HAW0 CICP14-201ENST00000629111 2732 ntBASIC14.67□□□□□ -0.06
BRF2Q9HAW0 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
BRF2Q9HAW0 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
BRF2Q9HAW0 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
BRF2Q9HAW0 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
BRF2Q9HAW0 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
BRF2Q9HAW0 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
BRF2Q9HAW0 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.66□□□□□ -0.06
BRF2Q9HAW0 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
BRF2Q9HAW0 AL359258.3-201ENST00000622910 2331 ntBASIC14.66□□□□□ -0.06
BRF2Q9HAW0 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
BRF2Q9HAW0 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
BRF2Q9HAW0 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
BRF2Q9HAW0 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
BRF2Q9HAW0 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
BRF2Q9HAW0 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
BRF2Q9HAW0 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.66□□□□□ -0.06
BRF2Q9HAW0 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
BRF2Q9HAW0 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
BRF2Q9HAW0 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.66□□□□□ -0.06
BRF2Q9HAW0 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
BRF2Q9HAW0 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
BRF2Q9HAW0 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.66□□□□□ -0.06
BRF2Q9HAW0 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
BRF2Q9HAW0 AL138799.1-201ENST00000448213 1675 ntBASIC14.66□□□□□ -0.06
BRF2Q9HAW0 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
BRF2Q9HAW0 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.66□□□□□ -0.06
BRF2Q9HAW0 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
BRF2Q9HAW0 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
BRF2Q9HAW0 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
BRF2Q9HAW0 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
BRF2Q9HAW0 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
BRF2Q9HAW0 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
BRF2Q9HAW0 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.66□□□□□ -0.06
BRF2Q9HAW0 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
BRF2Q9HAW0 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.66□□□□□ -0.06
BRF2Q9HAW0 RNA5SP421-201ENST00000516864 134 ntBASIC14.66□□□□□ -0.06
BRF2Q9HAW0 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
BRF2Q9HAW0 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.66□□□□□ -0.06
BRF2Q9HAW0 AC093813.1-201ENST00000605066 256 ntBASIC14.66□□□□□ -0.06
BRF2Q9HAW0 AC107373.2-201ENST00000607735 490 ntBASIC14.66□□□□□ -0.06
BRF2Q9HAW0 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
BRF2Q9HAW0 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
BRF2Q9HAW0 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
BRF2Q9HAW0 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
BRF2Q9HAW0 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
BRF2Q9HAW0 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
BRF2Q9HAW0 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
BRF2Q9HAW0 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
BRF2Q9HAW0 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
BRF2Q9HAW0 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
BRF2Q9HAW0 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
BRF2Q9HAW0 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.66□□□□□ -0.06
BRF2Q9HAW0 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
BRF2Q9HAW0 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
BRF2Q9HAW0 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
BRF2Q9HAW0 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
BRF2Q9HAW0 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
BRF2Q9HAW0 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
BRF2Q9HAW0 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.66□□□□□ -0.06
BRF2Q9HAW0 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
BRF2Q9HAW0 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
BRF2Q9HAW0 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
BRF2Q9HAW0 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.65□□□□□ -0.06
BRF2Q9HAW0 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
BRF2Q9HAW0 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
BRF2Q9HAW0 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
BRF2Q9HAW0 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
BRF2Q9HAW0 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.65□□□□□ -0.06
BRF2Q9HAW0 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
BRF2Q9HAW0 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.65□□□□□ -0.06
BRF2Q9HAW0 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
BRF2Q9HAW0 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.65□□□□□ -0.06
BRF2Q9HAW0 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
BRF2Q9HAW0 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
BRF2Q9HAW0 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
BRF2Q9HAW0 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
BRF2Q9HAW0 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
BRF2Q9HAW0 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
BRF2Q9HAW0 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
BRF2Q9HAW0 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
BRF2Q9HAW0 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
BRF2Q9HAW0 NUS1P3-201ENST00000423502 862 ntBASIC14.65□□□□□ -0.06
BRF2Q9HAW0 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.65□□□□□ -0.06
BRF2Q9HAW0 AC092183.1-201ENST00000469884 875 ntBASIC14.65□□□□□ -0.06
BRF2Q9HAW0 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.65□□□□□ -0.06
BRF2Q9HAW0 AC093004.1-201ENST00000508850 424 ntBASIC14.65□□□□□ -0.06
BRF2Q9HAW0 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.65□□□□□ -0.06
BRF2Q9HAW0 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
BRF2Q9HAW0 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.65□□□□□ -0.06
BRF2Q9HAW0 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
BRF2Q9HAW0 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.65□□□□□ -0.06
BRF2Q9HAW0 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.65□□□□□ -0.06
BRF2Q9HAW0 AC099568.2-201ENST00000609194 695 ntBASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms