Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC12.96□□□□□ -0.33
PCGF1Q9BSM1 GAPDHP21-201ENST00000450301 1010 ntBASIC12.96□□□□□ -0.33
PCGF1Q9BSM1 RN7SL752P-201ENST00000463779 287 ntBASIC12.96□□□□□ -0.33
PCGF1Q9BSM1 CFL1-212ENST00000531413 636 ntTSL 3 BASIC12.96□□□□□ -0.33
PCGF1Q9BSM1 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC12.96□□□□□ -0.33
PCGF1Q9BSM1 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
PCGF1Q9BSM1 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
PCGF1Q9BSM1 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC12.96□□□□□ -0.33
PCGF1Q9BSM1 WASH4P-201ENST00000564273 1246 ntBASIC12.96□□□□□ -0.33
PCGF1Q9BSM1 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
PCGF1Q9BSM1 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC12.96□□□□□ -0.33
PCGF1Q9BSM1 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC12.96□□□□□ -0.33
PCGF1Q9BSM1 AC093726.1-201ENST00000608064 963 ntBASIC12.96□□□□□ -0.33
PCGF1Q9BSM1 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC12.96□□□□□ -0.33
PCGF1Q9BSM1 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC12.96□□□□□ -0.33
PCGF1Q9BSM1 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC12.96□□□□□ -0.33
PCGF1Q9BSM1 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
PCGF1Q9BSM1 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC12.96□□□□□ -0.33
PCGF1Q9BSM1 CLK3P2-201ENST00000427566 1453 ntBASIC12.96□□□□□ -0.34
PCGF1Q9BSM1 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
PCGF1Q9BSM1 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
PCGF1Q9BSM1 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
PCGF1Q9BSM1 PRAL-201ENST00000624952 3286 ntBASIC12.96□□□□□ -0.34
PCGF1Q9BSM1 LRRFIP1P1-201ENST00000498774 2246 ntBASIC12.96□□□□□ -0.34
PCGF1Q9BSM1 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
PCGF1Q9BSM1 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
PCGF1Q9BSM1 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
PCGF1Q9BSM1 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
PCGF1Q9BSM1 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC12.96□□□□□ -0.34
PCGF1Q9BSM1 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
PCGF1Q9BSM1 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
PCGF1Q9BSM1 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PCGF1Q9BSM1 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC12.95□□□□□ -0.34
PCGF1Q9BSM1 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PCGF1Q9BSM1 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
PCGF1Q9BSM1 R3HDM2P2-201ENST00000401880 2116 ntBASIC12.95□□□□□ -0.34
PCGF1Q9BSM1 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
PCGF1Q9BSM1 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
PCGF1Q9BSM1 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PCGF1Q9BSM1 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
PCGF1Q9BSM1 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PCGF1Q9BSM1 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
PCGF1Q9BSM1 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC12.95□□□□□ -0.34
PCGF1Q9BSM1 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
PCGF1Q9BSM1 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
PCGF1Q9BSM1 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
PCGF1Q9BSM1 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC12.95□□□□□ -0.34
PCGF1Q9BSM1 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
PCGF1Q9BSM1 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PCGF1Q9BSM1 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PCGF1Q9BSM1 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PCGF1Q9BSM1 AC098614.1-201ENST00000368528 745 ntBASIC12.95□□□□□ -0.34
PCGF1Q9BSM1 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PCGF1Q9BSM1 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PCGF1Q9BSM1 PKIG-203ENST00000372887 769 ntTSL 3 BASIC12.95□□□□□ -0.34
PCGF1Q9BSM1 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
PCGF1Q9BSM1 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC12.95□□□□□ -0.34
PCGF1Q9BSM1 WBP2-203ENST00000433525 928 ntTSL 2 BASIC12.95□□□□□ -0.34
PCGF1Q9BSM1 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
PCGF1Q9BSM1 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC12.95□□□□□ -0.34
PCGF1Q9BSM1 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC12.95□□□□□ -0.34
PCGF1Q9BSM1 USP40-206ENST00000443711 628 ntTSL 2 BASIC12.95□□□□□ -0.34
PCGF1Q9BSM1 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC12.95□□□□□ -0.34
PCGF1Q9BSM1 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PCGF1Q9BSM1 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC12.95□□□□□ -0.34
PCGF1Q9BSM1 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC12.95□□□□□ -0.34
PCGF1Q9BSM1 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC12.95□□□□□ -0.34
PCGF1Q9BSM1 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
PCGF1Q9BSM1 FADS2-205ENST00000517839 469 ntTSL 3 BASIC12.95□□□□□ -0.34
PCGF1Q9BSM1 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC12.95□□□□□ -0.34
PCGF1Q9BSM1 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
PCGF1Q9BSM1 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC12.95□□□□□ -0.34
PCGF1Q9BSM1 RARRES2P5-201ENST00000564013 466 ntBASIC12.95□□□□□ -0.34
PCGF1Q9BSM1 AC036164.1-201ENST00000570544 333 ntBASIC12.95□□□□□ -0.34
PCGF1Q9BSM1 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC12.95□□□□□ -0.34
PCGF1Q9BSM1 SRP9-204ENST00000619790 377 ntTSL 2 BASIC12.95□□□□□ -0.34
PCGF1Q9BSM1 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
PCGF1Q9BSM1 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC12.95□□□□□ -0.34
PCGF1Q9BSM1 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PCGF1Q9BSM1 AC106881.1-201ENST00000605849 3329 ntBASIC12.95□□□□□ -0.34
PCGF1Q9BSM1 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
PCGF1Q9BSM1 CU639417.3-201ENST00000624240 1404 ntBASIC12.95□□□□□ -0.34
PCGF1Q9BSM1 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
PCGF1Q9BSM1 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
PCGF1Q9BSM1 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PCGF1Q9BSM1 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC12.95□□□□□ -0.34
PCGF1Q9BSM1 PPP1R26P4-201ENST00000619065 3527 ntBASIC12.95□□□□□ -0.34
PCGF1Q9BSM1 RERG-209ENST00000546331 1383 ntTSL 2 BASIC12.94□□□□□ -0.34
PCGF1Q9BSM1 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
PCGF1Q9BSM1 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
PCGF1Q9BSM1 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PCGF1Q9BSM1 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PCGF1Q9BSM1 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PCGF1Q9BSM1 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PCGF1Q9BSM1 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PCGF1Q9BSM1 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PCGF1Q9BSM1 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC12.94□□□□□ -0.34
PCGF1Q9BSM1 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
PCGF1Q9BSM1 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
PCGF1Q9BSM1 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms