Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 PNKD-204ENST00000436005 978 ntTSL 5 BASIC13.88□□□□□ -0.19
USB1Q9BQ65 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC13.88□□□□□ -0.19
USB1Q9BQ65 RN7SL692P-201ENST00000464677 288 ntBASIC13.88□□□□□ -0.19
USB1Q9BQ65 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC13.88□□□□□ -0.19
USB1Q9BQ65 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC13.88□□□□□ -0.19
USB1Q9BQ65 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
USB1Q9BQ65 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC13.88□□□□□ -0.19
USB1Q9BQ65 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
USB1Q9BQ65 AC068205.1-201ENST00000526615 689 ntTSL 3 BASIC13.88□□□□□ -0.19
USB1Q9BQ65 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC13.88□□□□□ -0.19
USB1Q9BQ65 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.88□□□□□ -0.19
USB1Q9BQ65 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC13.88□□□□□ -0.19
USB1Q9BQ65 RBM7-207ENST00000544582 692 ntTSL 3 BASIC13.88□□□□□ -0.19
USB1Q9BQ65 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
USB1Q9BQ65 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.88□□□□□ -0.19
USB1Q9BQ65 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC13.88□□□□□ -0.19
USB1Q9BQ65 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
USB1Q9BQ65 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC13.88□□□□□ -0.19
USB1Q9BQ65 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
USB1Q9BQ65 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.88□□□□□ -0.19
USB1Q9BQ65 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
USB1Q9BQ65 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.88□□□□□ -0.19
USB1Q9BQ65 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
USB1Q9BQ65 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
USB1Q9BQ65 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
USB1Q9BQ65 AC010327.5-201ENST00000586923 3061 ntBASIC13.88□□□□□ -0.19
USB1Q9BQ65 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC13.88□□□□□ -0.19
USB1Q9BQ65 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
USB1Q9BQ65 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
USB1Q9BQ65 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
USB1Q9BQ65 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
USB1Q9BQ65 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
USB1Q9BQ65 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
USB1Q9BQ65 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
USB1Q9BQ65 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC13.88□□□□□ -0.19
USB1Q9BQ65 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
USB1Q9BQ65 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
USB1Q9BQ65 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
USB1Q9BQ65 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
USB1Q9BQ65 AC138969.3-201ENST00000546612 1459 ntBASIC13.87□□□□□ -0.19
USB1Q9BQ65 AC138932.2-201ENST00000548268 1459 ntBASIC13.87□□□□□ -0.19
USB1Q9BQ65 AC126755.4-201ENST00000549796 1459 ntBASIC13.87□□□□□ -0.19
USB1Q9BQ65 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
USB1Q9BQ65 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
USB1Q9BQ65 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
USB1Q9BQ65 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC13.87□□□□□ -0.19
USB1Q9BQ65 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
USB1Q9BQ65 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
USB1Q9BQ65 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
USB1Q9BQ65 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
USB1Q9BQ65 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
USB1Q9BQ65 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
USB1Q9BQ65 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
USB1Q9BQ65 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
USB1Q9BQ65 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
USB1Q9BQ65 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC13.87□□□□□ -0.19
USB1Q9BQ65 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
USB1Q9BQ65 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
USB1Q9BQ65 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
USB1Q9BQ65 AZGP1P1-201ENST00000411909 902 ntBASIC13.87□□□□□ -0.19
USB1Q9BQ65 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC13.87□□□□□ -0.19
USB1Q9BQ65 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.87□□□□□ -0.19
USB1Q9BQ65 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC13.87□□□□□ -0.19
USB1Q9BQ65 AL121578.1-201ENST00000428051 892 ntBASIC13.87□□□□□ -0.19
USB1Q9BQ65 KRT17P7-201ENST00000451704 1104 ntBASIC13.87□□□□□ -0.19
USB1Q9BQ65 TMPRSS11CP-201ENST00000453277 683 ntBASIC13.87□□□□□ -0.19
USB1Q9BQ65 RPL13AP25-201ENST00000484130 612 ntBASIC13.87□□□□□ -0.19
USB1Q9BQ65 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.87□□□□□ -0.19
USB1Q9BQ65 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC13.87□□□□□ -0.19
USB1Q9BQ65 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC13.87□□□□□ -0.19
USB1Q9BQ65 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
USB1Q9BQ65 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
USB1Q9BQ65 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC13.87□□□□□ -0.19
USB1Q9BQ65 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC13.87□□□□□ -0.19
USB1Q9BQ65 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC13.87□□□□□ -0.19
USB1Q9BQ65 AC036164.1-201ENST00000570544 333 ntBASIC13.87□□□□□ -0.19
USB1Q9BQ65 AP001793.2-201ENST00000580267 780 ntTSL 2 BASIC13.87□□□□□ -0.19
USB1Q9BQ65 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC13.87□□□□□ -0.19
USB1Q9BQ65 TMEM261P1-201ENST00000604899 340 ntBASIC13.87□□□□□ -0.19
USB1Q9BQ65 AL451064.1-201ENST00000607718 471 ntBASIC13.87□□□□□ -0.19
USB1Q9BQ65 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
USB1Q9BQ65 AL035252.4-201ENST00000624174 288 ntBASIC13.87□□□□□ -0.19
USB1Q9BQ65 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
USB1Q9BQ65 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
USB1Q9BQ65 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC13.87□□□□□ -0.19
USB1Q9BQ65 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
USB1Q9BQ65 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
USB1Q9BQ65 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.87□□□□□ -0.19
USB1Q9BQ65 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
USB1Q9BQ65 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
USB1Q9BQ65 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
USB1Q9BQ65 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
USB1Q9BQ65 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
USB1Q9BQ65 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
USB1Q9BQ65 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
USB1Q9BQ65 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
USB1Q9BQ65 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
USB1Q9BQ65 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
USB1Q9BQ65 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
USB1Q9BQ65 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms