Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SYNGAP1Q96PV0 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SYNGAP1Q96PV0 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SYNGAP1Q96PV0 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SYNGAP1Q96PV0 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SYNGAP1Q96PV0 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
SYNGAP1Q96PV0 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SYNGAP1Q96PV0 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC17.35■□□□□ 0.37
SYNGAP1Q96PV0 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SYNGAP1Q96PV0 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SYNGAP1Q96PV0 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SYNGAP1Q96PV0 LSM5-207ENST00000410044 687 ntTSL 3 BASIC17.35■□□□□ 0.37
SYNGAP1Q96PV0 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC17.35■□□□□ 0.37
SYNGAP1Q96PV0 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SYNGAP1Q96PV0 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC17.35■□□□□ 0.37
SYNGAP1Q96PV0 FOS-206ENST00000555347 1280 ntTSL 2 BASIC17.35■□□□□ 0.37
SYNGAP1Q96PV0 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SYNGAP1Q96PV0 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC17.35■□□□□ 0.37
SYNGAP1Q96PV0 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC17.35■□□□□ 0.37
SYNGAP1Q96PV0 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.35■□□□□ 0.37
SYNGAP1Q96PV0 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SYNGAP1Q96PV0 AC084364.1-201ENST00000551967 1556 ntBASIC17.35■□□□□ 0.37
SYNGAP1Q96PV0 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SYNGAP1Q96PV0 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SYNGAP1Q96PV0 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
SYNGAP1Q96PV0 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.35■□□□□ 0.37
SYNGAP1Q96PV0 AL596257.1-201ENST00000641463 2694 ntBASIC17.35■□□□□ 0.37
SYNGAP1Q96PV0 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.35■□□□□ 0.37
SYNGAP1Q96PV0 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SYNGAP1Q96PV0 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17.34■□□□□ 0.37
SYNGAP1Q96PV0 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SYNGAP1Q96PV0 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SYNGAP1Q96PV0 AC009090.5-201ENST00000624886 2285 ntBASIC17.34■□□□□ 0.37
SYNGAP1Q96PV0 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SYNGAP1Q96PV0 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SYNGAP1Q96PV0 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SYNGAP1Q96PV0 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
SYNGAP1Q96PV0 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SYNGAP1Q96PV0 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SYNGAP1Q96PV0 AP005117.1-202ENST00000581724 1908 ntBASIC17.34■□□□□ 0.37
SYNGAP1Q96PV0 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SYNGAP1Q96PV0 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SYNGAP1Q96PV0 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC17.34■□□□□ 0.37
SYNGAP1Q96PV0 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
SYNGAP1Q96PV0 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SYNGAP1Q96PV0 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SYNGAP1Q96PV0 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SYNGAP1Q96PV0 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SYNGAP1Q96PV0 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SYNGAP1Q96PV0 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SYNGAP1Q96PV0 FAM8A4P-201ENST00000435433 1213 ntBASIC17.34■□□□□ 0.37
SYNGAP1Q96PV0 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC17.34■□□□□ 0.37
SYNGAP1Q96PV0 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SYNGAP1Q96PV0 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC17.34■□□□□ 0.37
SYNGAP1Q96PV0 AC126915.1-201ENST00000522847 1038 ntBASIC17.34■□□□□ 0.37
SYNGAP1Q96PV0 NEU3-202ENST00000526068 431 ntTSL 2 BASIC17.34■□□□□ 0.37
SYNGAP1Q96PV0 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC17.34■□□□□ 0.37
SYNGAP1Q96PV0 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC17.34■□□□□ 0.37
SYNGAP1Q96PV0 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC17.34■□□□□ 0.37
SYNGAP1Q96PV0 DIO1-215ENST00000610607 796 ntTSL 5 BASIC17.34■□□□□ 0.37
SYNGAP1Q96PV0 AL021578.1-201ENST00000613646 709 ntBASIC17.34■□□□□ 0.37
SYNGAP1Q96PV0 AC244157.2-201ENST00000616239 1006 ntBASIC17.34■□□□□ 0.37
SYNGAP1Q96PV0 AL603764.1-201ENST00000636452 321 ntBASIC17.34■□□□□ 0.37
SYNGAP1Q96PV0 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SYNGAP1Q96PV0 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SYNGAP1Q96PV0 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SYNGAP1Q96PV0 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SYNGAP1Q96PV0 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SYNGAP1Q96PV0 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
SYNGAP1Q96PV0 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC17.34■□□□□ 0.37
SYNGAP1Q96PV0 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SYNGAP1Q96PV0 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC17.34■□□□□ 0.37
SYNGAP1Q96PV0 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SYNGAP1Q96PV0 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.34■□□□□ 0.37
SYNGAP1Q96PV0 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SYNGAP1Q96PV0 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SYNGAP1Q96PV0 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SYNGAP1Q96PV0 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SYNGAP1Q96PV0 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
SYNGAP1Q96PV0 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
SYNGAP1Q96PV0 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC17.33■□□□□ 0.37
SYNGAP1Q96PV0 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SYNGAP1Q96PV0 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
SYNGAP1Q96PV0 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SYNGAP1Q96PV0 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SYNGAP1Q96PV0 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SYNGAP1Q96PV0 CICP13-201ENST00000422015 2789 ntBASIC17.33■□□□□ 0.36
SYNGAP1Q96PV0 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SYNGAP1Q96PV0 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SYNGAP1Q96PV0 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC17.33■□□□□ 0.36
SYNGAP1Q96PV0 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC17.33■□□□□ 0.36
SYNGAP1Q96PV0 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
SYNGAP1Q96PV0 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SYNGAP1Q96PV0 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC17.33■□□□□ 0.36
SYNGAP1Q96PV0 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC17.33■□□□□ 0.36
SYNGAP1Q96PV0 MDH2-205ENST00000461263 648 ntTSL 2 BASIC17.33■□□□□ 0.36
SYNGAP1Q96PV0 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SYNGAP1Q96PV0 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC17.33■□□□□ 0.36
SYNGAP1Q96PV0 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
SYNGAP1Q96PV0 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms