Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.15■□□□□ 0.18
CASD1Q96PB1 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CASD1Q96PB1 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
CASD1Q96PB1 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
CASD1Q96PB1 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CASD1Q96PB1 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CASD1Q96PB1 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CASD1Q96PB1 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CASD1Q96PB1 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CASD1Q96PB1 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CASD1Q96PB1 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CASD1Q96PB1 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC16.14■□□□□ 0.17
CASD1Q96PB1 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC16.14■□□□□ 0.17
CASD1Q96PB1 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CASD1Q96PB1 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CASD1Q96PB1 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CASD1Q96PB1 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CASD1Q96PB1 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.14■□□□□ 0.17
CASD1Q96PB1 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.14■□□□□ 0.17
CASD1Q96PB1 GGCT-203ENST00000409144 836 ntTSL 2 BASIC16.14■□□□□ 0.17
CASD1Q96PB1 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CASD1Q96PB1 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC16.14■□□□□ 0.17
CASD1Q96PB1 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CASD1Q96PB1 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC16.14■□□□□ 0.17
CASD1Q96PB1 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC16.14■□□□□ 0.17
CASD1Q96PB1 FGFR3P5-201ENST00000564496 886 ntBASIC16.14■□□□□ 0.17
CASD1Q96PB1 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
CASD1Q96PB1 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC16.14■□□□□ 0.17
CASD1Q96PB1 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC16.14■□□□□ 0.17
CASD1Q96PB1 AC090164.2-201ENST00000611487 516 ntBASIC16.14■□□□□ 0.17
CASD1Q96PB1 AL805961.1-203ENST00000641078 1258 ntBASIC16.14■□□□□ 0.17
CASD1Q96PB1 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.14■□□□□ 0.17
CASD1Q96PB1 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC16.14■□□□□ 0.17
CASD1Q96PB1 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CASD1Q96PB1 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CASD1Q96PB1 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CASD1Q96PB1 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CASD1Q96PB1 PCDHA1-201ENST00000378133 2726 ntBASIC16.14■□□□□ 0.17
CASD1Q96PB1 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CASD1Q96PB1 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CASD1Q96PB1 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CASD1Q96PB1 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CASD1Q96PB1 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CASD1Q96PB1 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.13■□□□□ 0.17
CASD1Q96PB1 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CASD1Q96PB1 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CASD1Q96PB1 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
CASD1Q96PB1 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CASD1Q96PB1 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CASD1Q96PB1 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CASD1Q96PB1 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CASD1Q96PB1 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC16.13■□□□□ 0.17
CASD1Q96PB1 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
CASD1Q96PB1 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC16.13■□□□□ 0.17
CASD1Q96PB1 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CASD1Q96PB1 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CASD1Q96PB1 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CASD1Q96PB1 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CASD1Q96PB1 HINT2P1-201ENST00000419438 481 ntBASIC16.13■□□□□ 0.17
CASD1Q96PB1 CMC1-204ENST00000423894 549 ntTSL 2 BASIC16.13■□□□□ 0.17
CASD1Q96PB1 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC16.13■□□□□ 0.17
CASD1Q96PB1 PTPA-217ENST00000434095 870 ntTSL 2 BASIC16.13■□□□□ 0.17
CASD1Q96PB1 PUDPP3-201ENST00000445368 636 ntBASIC16.13■□□□□ 0.17
CASD1Q96PB1 AC012618.1-201ENST00000461223 412 ntBASIC16.13■□□□□ 0.17
CASD1Q96PB1 RPL18P13-201ENST00000478088 569 ntBASIC16.13■□□□□ 0.17
CASD1Q96PB1 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CASD1Q96PB1 NUP210P1-202ENST00000504322 710 ntBASIC16.13■□□□□ 0.17
CASD1Q96PB1 AC134698.3-201ENST00000523880 214 ntBASIC16.13■□□□□ 0.17
CASD1Q96PB1 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CASD1Q96PB1 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC16.13■□□□□ 0.17
CASD1Q96PB1 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC16.13■□□□□ 0.17
CASD1Q96PB1 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC16.13■□□□□ 0.17
CASD1Q96PB1 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CASD1Q96PB1 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.13■□□□□ 0.17
CASD1Q96PB1 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CASD1Q96PB1 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CASD1Q96PB1 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CASD1Q96PB1 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CASD1Q96PB1 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CASD1Q96PB1 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CASD1Q96PB1 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CASD1Q96PB1 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.13■□□□□ 0.17
CASD1Q96PB1 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CASD1Q96PB1 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
CASD1Q96PB1 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.13■□□□□ 0.17
CASD1Q96PB1 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CASD1Q96PB1 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.13■□□□□ 0.17
CASD1Q96PB1 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CASD1Q96PB1 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CASD1Q96PB1 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CASD1Q96PB1 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CASD1Q96PB1 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CASD1Q96PB1 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
CASD1Q96PB1 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CASD1Q96PB1 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CASD1Q96PB1 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CASD1Q96PB1 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CASD1Q96PB1 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CASD1Q96PB1 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CASD1Q96PB1 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms