Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.79■□□□□ 0.12
RPRD1AQ96P16 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
RPRD1AQ96P16 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RPRD1AQ96P16 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
RPRD1AQ96P16 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.79■□□□□ 0.12
RPRD1AQ96P16 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC15.79■□□□□ 0.12
RPRD1AQ96P16 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RPRD1AQ96P16 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RPRD1AQ96P16 AC126755.1-201ENST00000525846 6405 ntBASIC15.79■□□□□ 0.12
RPRD1AQ96P16 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RPRD1AQ96P16 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RPRD1AQ96P16 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RPRD1AQ96P16 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.79■□□□□ 0.12
RPRD1AQ96P16 KLF2P2-201ENST00000416807 1039 ntBASIC15.79■□□□□ 0.12
RPRD1AQ96P16 KRT43P-201ENST00000434019 910 ntBASIC15.79■□□□□ 0.12
RPRD1AQ96P16 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.79■□□□□ 0.12
RPRD1AQ96P16 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.79■□□□□ 0.12
RPRD1AQ96P16 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.79■□□□□ 0.12
RPRD1AQ96P16 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC15.79■□□□□ 0.12
RPRD1AQ96P16 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RPRD1AQ96P16 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RPRD1AQ96P16 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.79■□□□□ 0.12
RPRD1AQ96P16 KRT17P8-201ENST00000540749 863 ntBASIC15.79■□□□□ 0.12
RPRD1AQ96P16 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.79■□□□□ 0.12
RPRD1AQ96P16 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.79■□□□□ 0.12
RPRD1AQ96P16 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.79■□□□□ 0.12
RPRD1AQ96P16 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.79■□□□□ 0.12
RPRD1AQ96P16 AL022328.1-201ENST00000610050 478 ntBASIC15.79■□□□□ 0.12
RPRD1AQ96P16 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RPRD1AQ96P16 AL162274.1-201ENST00000617191 1098 ntBASIC15.79■□□□□ 0.12
RPRD1AQ96P16 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
RPRD1AQ96P16 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RPRD1AQ96P16 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RPRD1AQ96P16 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RPRD1AQ96P16 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RPRD1AQ96P16 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RPRD1AQ96P16 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RPRD1AQ96P16 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RPRD1AQ96P16 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RPRD1AQ96P16 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RPRD1AQ96P16 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.79■□□□□ 0.12
RPRD1AQ96P16 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.79■□□□□ 0.12
RPRD1AQ96P16 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
RPRD1AQ96P16 AL161772.1-201ENST00000610494 4412 ntBASIC15.79■□□□□ 0.12
RPRD1AQ96P16 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
RPRD1AQ96P16 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RPRD1AQ96P16 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
RPRD1AQ96P16 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.79■□□□□ 0.12
RPRD1AQ96P16 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
RPRD1AQ96P16 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RPRD1AQ96P16 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RPRD1AQ96P16 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RPRD1AQ96P16 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RPRD1AQ96P16 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RPRD1AQ96P16 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RPRD1AQ96P16 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
RPRD1AQ96P16 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.78■□□□□ 0.12
RPRD1AQ96P16 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.78■□□□□ 0.12
RPRD1AQ96P16 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.78■□□□□ 0.12
RPRD1AQ96P16 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RPRD1AQ96P16 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RPRD1AQ96P16 KRT8P35-201ENST00000483942 1338 ntBASIC15.78■□□□□ 0.12
RPRD1AQ96P16 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
RPRD1AQ96P16 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RPRD1AQ96P16 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RPRD1AQ96P16 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RPRD1AQ96P16 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RPRD1AQ96P16 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RPRD1AQ96P16 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RPRD1AQ96P16 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.78■□□□□ 0.12
RPRD1AQ96P16 AC005229.1-201ENST00000392885 409 ntBASIC15.78■□□□□ 0.12
RPRD1AQ96P16 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.78■□□□□ 0.12
RPRD1AQ96P16 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15.78■□□□□ 0.12
RPRD1AQ96P16 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RPRD1AQ96P16 AC114812.1-204ENST00000449669 728 ntBASIC15.78■□□□□ 0.12
RPRD1AQ96P16 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.78■□□□□ 0.12
RPRD1AQ96P16 GPR53P-205ENST00000457298 1084 ntBASIC15.78■□□□□ 0.12
RPRD1AQ96P16 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RPRD1AQ96P16 CFL1-212ENST00000531413 636 ntTSL 3 BASIC15.78■□□□□ 0.12
RPRD1AQ96P16 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.78■□□□□ 0.12
RPRD1AQ96P16 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.78■□□□□ 0.12
RPRD1AQ96P16 AC106886.1-201ENST00000568660 600 ntBASIC15.78■□□□□ 0.12
RPRD1AQ96P16 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.78■□□□□ 0.12
RPRD1AQ96P16 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RPRD1AQ96P16 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RPRD1AQ96P16 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RPRD1AQ96P16 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.78■□□□□ 0.12
RPRD1AQ96P16 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.78■□□□□ 0.12
RPRD1AQ96P16 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
RPRD1AQ96P16 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
RPRD1AQ96P16 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RPRD1AQ96P16 AL359258.3-201ENST00000622910 2331 ntBASIC15.78■□□□□ 0.12
RPRD1AQ96P16 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
RPRD1AQ96P16 REXO1L4P-201ENST00000605109 1937 ntBASIC15.78■□□□□ 0.12
RPRD1AQ96P16 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RPRD1AQ96P16 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
RPRD1AQ96P16 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RPRD1AQ96P16 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.78■□□□□ 0.12
RPRD1AQ96P16 AC013268.4-201ENST00000637413 2228 ntBASIC15.78■□□□□ 0.12
RPRD1AQ96P16 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms