Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.54□□□□□ -0.08
TM9SF4Q92544 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC14.54□□□□□ -0.08
TM9SF4Q92544 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC14.54□□□□□ -0.08
TM9SF4Q92544 USP32P1-208ENST00000506594 1164 ntBASIC14.54□□□□□ -0.08
TM9SF4Q92544 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.54□□□□□ -0.08
TM9SF4Q92544 SLED1-202ENST00000512051 380 ntBASIC14.54□□□□□ -0.08
TM9SF4Q92544 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC14.54□□□□□ -0.08
TM9SF4Q92544 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.54□□□□□ -0.08
TM9SF4Q92544 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TM9SF4Q92544 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC14.54□□□□□ -0.08
TM9SF4Q92544 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.54□□□□□ -0.08
TM9SF4Q92544 BRI3BPP1-201ENST00000594224 787 ntBASIC14.54□□□□□ -0.08
TM9SF4Q92544 AL391069.4-201ENST00000609583 481 ntBASIC14.54□□□□□ -0.08
TM9SF4Q92544 RPS24-214ENST00000613865 538 ntTSL 5 BASIC14.54□□□□□ -0.08
TM9SF4Q92544 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TM9SF4Q92544 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC14.54□□□□□ -0.08
TM9SF4Q92544 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TM9SF4Q92544 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TM9SF4Q92544 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TM9SF4Q92544 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TM9SF4Q92544 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TM9SF4Q92544 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TM9SF4Q92544 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.54□□□□□ -0.08
TM9SF4Q92544 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
TM9SF4Q92544 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TM9SF4Q92544 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.54□□□□□ -0.08
TM9SF4Q92544 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TM9SF4Q92544 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TM9SF4Q92544 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
TM9SF4Q92544 AC023908.3-201ENST00000564211 3047 ntBASIC14.54□□□□□ -0.08
TM9SF4Q92544 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TM9SF4Q92544 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
TM9SF4Q92544 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TM9SF4Q92544 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.53□□□□□ -0.08
TM9SF4Q92544 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TM9SF4Q92544 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.53□□□□□ -0.08
TM9SF4Q92544 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.53□□□□□ -0.08
TM9SF4Q92544 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TM9SF4Q92544 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TM9SF4Q92544 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TM9SF4Q92544 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.53□□□□□ -0.08
TM9SF4Q92544 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TM9SF4Q92544 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TM9SF4Q92544 INTS4P2-202ENST00000614726 2019 ntBASIC14.53□□□□□ -0.08
TM9SF4Q92544 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TM9SF4Q92544 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.53□□□□□ -0.08
TM9SF4Q92544 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TM9SF4Q92544 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.53□□□□□ -0.08
TM9SF4Q92544 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
TM9SF4Q92544 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.53□□□□□ -0.08
TM9SF4Q92544 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.53□□□□□ -0.08
TM9SF4Q92544 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TM9SF4Q92544 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TM9SF4Q92544 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TM9SF4Q92544 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.53□□□□□ -0.08
TM9SF4Q92544 MGST3-203ENST00000367885 680 ntTSL 2 BASIC14.53□□□□□ -0.08
TM9SF4Q92544 TOMM22P5-201ENST00000416399 439 ntBASIC14.53□□□□□ -0.08
TM9SF4Q92544 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TM9SF4Q92544 TARDBPP1-201ENST00000442013 1203 ntBASIC14.53□□□□□ -0.08
TM9SF4Q92544 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC14.53□□□□□ -0.08
TM9SF4Q92544 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TM9SF4Q92544 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.53□□□□□ -0.08
TM9SF4Q92544 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.53□□□□□ -0.08
TM9SF4Q92544 MIR5189-201ENST00000577370 114 ntBASIC14.53□□□□□ -0.08
TM9SF4Q92544 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC14.53□□□□□ -0.08
TM9SF4Q92544 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.53□□□□□ -0.08
TM9SF4Q92544 AL033527.4-201ENST00000641026 673 ntBASIC14.53□□□□□ -0.08
TM9SF4Q92544 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TM9SF4Q92544 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TM9SF4Q92544 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TM9SF4Q92544 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TM9SF4Q92544 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TM9SF4Q92544 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TM9SF4Q92544 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
TM9SF4Q92544 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TM9SF4Q92544 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.53□□□□□ -0.08
TM9SF4Q92544 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TM9SF4Q92544 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.53□□□□□ -0.08
TM9SF4Q92544 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
TM9SF4Q92544 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.52□□□□□ -0.08
TM9SF4Q92544 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TM9SF4Q92544 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TM9SF4Q92544 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
TM9SF4Q92544 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TM9SF4Q92544 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
TM9SF4Q92544 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.52□□□□□ -0.08
TM9SF4Q92544 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TM9SF4Q92544 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TM9SF4Q92544 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TM9SF4Q92544 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
TM9SF4Q92544 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC14.52□□□□□ -0.09
TM9SF4Q92544 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TM9SF4Q92544 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.52□□□□□ -0.09
TM9SF4Q92544 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC14.52□□□□□ -0.09
TM9SF4Q92544 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC14.52□□□□□ -0.09
TM9SF4Q92544 CTBP2P5-201ENST00000454986 1264 ntBASIC14.52□□□□□ -0.09
TM9SF4Q92544 CROCCP4-201ENST00000457096 498 ntBASIC14.52□□□□□ -0.09
TM9SF4Q92544 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.52□□□□□ -0.09
TM9SF4Q92544 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.52□□□□□ -0.09
TM9SF4Q92544 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms