Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.72□□□□□ -0.21
RNF138Q8WVD3 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RNF138Q8WVD3 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC13.72□□□□□ -0.21
RNF138Q8WVD3 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF138Q8WVD3 ANKRD30BP2-201ENST00000435744 1610 ntBASIC13.72□□□□□ -0.21
RNF138Q8WVD3 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF138Q8WVD3 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF138Q8WVD3 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
RNF138Q8WVD3 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RNF138Q8WVD3 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC13.71□□□□□ -0.21
RNF138Q8WVD3 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.71□□□□□ -0.21
RNF138Q8WVD3 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.71□□□□□ -0.21
RNF138Q8WVD3 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RNF138Q8WVD3 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RNF138Q8WVD3 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
RNF138Q8WVD3 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RNF138Q8WVD3 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.71□□□□□ -0.21
RNF138Q8WVD3 AHCYP2-201ENST00000430630 1300 ntBASIC13.71□□□□□ -0.21
RNF138Q8WVD3 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.71□□□□□ -0.21
RNF138Q8WVD3 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RNF138Q8WVD3 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RNF138Q8WVD3 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
RNF138Q8WVD3 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RNF138Q8WVD3 AC011840.2-201ENST00000563063 1520 ntBASIC13.71□□□□□ -0.21
RNF138Q8WVD3 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
RNF138Q8WVD3 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RNF138Q8WVD3 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RNF138Q8WVD3 TPO-206ENST00000382269 1155 ntTSL 5 BASIC13.71□□□□□ -0.21
RNF138Q8WVD3 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
RNF138Q8WVD3 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RNF138Q8WVD3 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RNF138Q8WVD3 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RNF138Q8WVD3 AC007969.1-201ENST00000433675 447 ntBASIC13.71□□□□□ -0.21
RNF138Q8WVD3 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC13.71□□□□□ -0.21
RNF138Q8WVD3 ATP5G2P4-201ENST00000442175 420 ntBASIC13.71□□□□□ -0.21
RNF138Q8WVD3 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC13.71□□□□□ -0.21
RNF138Q8WVD3 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC13.71□□□□□ -0.21
RNF138Q8WVD3 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC13.71□□□□□ -0.21
RNF138Q8WVD3 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC13.71□□□□□ -0.21
RNF138Q8WVD3 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC13.71□□□□□ -0.21
RNF138Q8WVD3 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC13.71□□□□□ -0.21
RNF138Q8WVD3 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RNF138Q8WVD3 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC13.71□□□□□ -0.21
RNF138Q8WVD3 DUX4L45-201ENST00000566406 1057 ntBASIC13.71□□□□□ -0.21
RNF138Q8WVD3 IFT20-216ENST00000588477 774 ntTSL 5 BASIC13.71□□□□□ -0.21
RNF138Q8WVD3 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC13.71□□□□□ -0.21
RNF138Q8WVD3 AC073413.1-201ENST00000603927 732 ntBASIC13.71□□□□□ -0.21
RNF138Q8WVD3 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RNF138Q8WVD3 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
RNF138Q8WVD3 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RNF138Q8WVD3 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
RNF138Q8WVD3 AC018442.1-201ENST00000421439 2061 ntBASIC13.71□□□□□ -0.21
RNF138Q8WVD3 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RNF138Q8WVD3 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RNF138Q8WVD3 AC144831.1-201ENST00000573312 2656 ntBASIC13.71□□□□□ -0.22
RNF138Q8WVD3 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
RNF138Q8WVD3 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
RNF138Q8WVD3 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.71□□□□□ -0.22
RNF138Q8WVD3 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
RNF138Q8WVD3 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
RNF138Q8WVD3 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
RNF138Q8WVD3 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
RNF138Q8WVD3 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC13.71□□□□□ -0.22
RNF138Q8WVD3 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF138Q8WVD3 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
RNF138Q8WVD3 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC13.7□□□□□ -0.22
RNF138Q8WVD3 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF138Q8WVD3 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC13.7□□□□□ -0.22
RNF138Q8WVD3 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC13.7□□□□□ -0.22
RNF138Q8WVD3 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.7□□□□□ -0.22
RNF138Q8WVD3 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF138Q8WVD3 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF138Q8WVD3 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF138Q8WVD3 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF138Q8WVD3 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF138Q8WVD3 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
RNF138Q8WVD3 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF138Q8WVD3 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF138Q8WVD3 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF138Q8WVD3 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
RNF138Q8WVD3 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RNF138Q8WVD3 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF138Q8WVD3 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF138Q8WVD3 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF138Q8WVD3 SNX21-203ENST00000372541 771 ntTSL 2 BASIC13.7□□□□□ -0.22
RNF138Q8WVD3 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF138Q8WVD3 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RNF138Q8WVD3 STX1A-203ENST00000395155 783 ntTSL 2 BASIC13.7□□□□□ -0.22
RNF138Q8WVD3 MPV17-205ENST00000402310 906 ntTSL 5 BASIC13.7□□□□□ -0.22
RNF138Q8WVD3 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
RNF138Q8WVD3 FAM8A4P-201ENST00000435433 1213 ntBASIC13.7□□□□□ -0.22
RNF138Q8WVD3 CSF2RBP1-201ENST00000447905 391 ntBASIC13.7□□□□□ -0.22
RNF138Q8WVD3 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RNF138Q8WVD3 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC13.7□□□□□ -0.22
RNF138Q8WVD3 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RNF138Q8WVD3 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC13.7□□□□□ -0.22
RNF138Q8WVD3 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RNF138Q8WVD3 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC13.7□□□□□ -0.22
RNF138Q8WVD3 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC13.7□□□□□ -0.22
RNF138Q8WVD3 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms