Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SIMC1Q8NDZ2 AC236430.1-201ENST00000402231 743 ntBASIC14.52□□□□□ -0.09
SIMC1Q8NDZ2 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.52□□□□□ -0.09
SIMC1Q8NDZ2 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.52□□□□□ -0.09
SIMC1Q8NDZ2 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.52□□□□□ -0.09
SIMC1Q8NDZ2 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.52□□□□□ -0.09
SIMC1Q8NDZ2 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.52□□□□□ -0.09
SIMC1Q8NDZ2 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.52□□□□□ -0.09
SIMC1Q8NDZ2 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.52□□□□□ -0.09
SIMC1Q8NDZ2 MIR8072-201ENST00000614241 80 ntBASIC14.52□□□□□ -0.09
SIMC1Q8NDZ2 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SIMC1Q8NDZ2 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
SIMC1Q8NDZ2 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
SIMC1Q8NDZ2 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.52□□□□□ -0.09
SIMC1Q8NDZ2 AC105233.6-201ENST00000642093 218 ntBASIC14.52□□□□□ -0.09
SIMC1Q8NDZ2 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SIMC1Q8NDZ2 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
SIMC1Q8NDZ2 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SIMC1Q8NDZ2 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.52□□□□□ -0.09
SIMC1Q8NDZ2 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.52□□□□□ -0.09
SIMC1Q8NDZ2 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.52□□□□□ -0.09
SIMC1Q8NDZ2 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SIMC1Q8NDZ2 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.52□□□□□ -0.09
SIMC1Q8NDZ2 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SIMC1Q8NDZ2 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SIMC1Q8NDZ2 AC007191.1-201ENST00000623179 2995 ntBASIC14.52□□□□□ -0.09
SIMC1Q8NDZ2 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SIMC1Q8NDZ2 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
SIMC1Q8NDZ2 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SIMC1Q8NDZ2 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.51□□□□□ -0.09
SIMC1Q8NDZ2 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SIMC1Q8NDZ2 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.51□□□□□ -0.09
SIMC1Q8NDZ2 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
SIMC1Q8NDZ2 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SIMC1Q8NDZ2 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
SIMC1Q8NDZ2 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14.51□□□□□ -0.09
SIMC1Q8NDZ2 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.51□□□□□ -0.09
SIMC1Q8NDZ2 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
SIMC1Q8NDZ2 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
SIMC1Q8NDZ2 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.51□□□□□ -0.09
SIMC1Q8NDZ2 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SIMC1Q8NDZ2 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.51□□□□□ -0.09
SIMC1Q8NDZ2 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SIMC1Q8NDZ2 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.51□□□□□ -0.09
SIMC1Q8NDZ2 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SIMC1Q8NDZ2 COPE-202ENST00000349893 948 ntTSL 2 BASIC14.51□□□□□ -0.09
SIMC1Q8NDZ2 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
SIMC1Q8NDZ2 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.51□□□□□ -0.09
SIMC1Q8NDZ2 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC14.51□□□□□ -0.09
SIMC1Q8NDZ2 AL133267.1-201ENST00000398220 340 ntBASIC14.51□□□□□ -0.09
SIMC1Q8NDZ2 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.51□□□□□ -0.09
SIMC1Q8NDZ2 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.51□□□□□ -0.09
SIMC1Q8NDZ2 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.51□□□□□ -0.09
SIMC1Q8NDZ2 KRT18P43-201ENST00000469825 1281 ntBASIC14.51□□□□□ -0.09
SIMC1Q8NDZ2 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SIMC1Q8NDZ2 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SIMC1Q8NDZ2 TPRX2P-201ENST00000535362 881 ntBASIC14.51□□□□□ -0.09
SIMC1Q8NDZ2 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.51□□□□□ -0.09
SIMC1Q8NDZ2 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.51□□□□□ -0.09
SIMC1Q8NDZ2 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
SIMC1Q8NDZ2 LINC02560-201ENST00000596379 459 ntBASIC14.51□□□□□ -0.09
SIMC1Q8NDZ2 AC025181.2-201ENST00000606994 802 ntBASIC14.51□□□□□ -0.09
SIMC1Q8NDZ2 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.51□□□□□ -0.09
SIMC1Q8NDZ2 AC148477.4-201ENST00000613430 1793 ntBASIC14.51□□□□□ -0.09
SIMC1Q8NDZ2 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
SIMC1Q8NDZ2 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SIMC1Q8NDZ2 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
SIMC1Q8NDZ2 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
SIMC1Q8NDZ2 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
SIMC1Q8NDZ2 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
SIMC1Q8NDZ2 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
SIMC1Q8NDZ2 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SIMC1Q8NDZ2 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
SIMC1Q8NDZ2 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SIMC1Q8NDZ2 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SIMC1Q8NDZ2 AC015656.1-201ENST00000624209 3578 ntBASIC14.5□□□□□ -0.09
SIMC1Q8NDZ2 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
SIMC1Q8NDZ2 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
SIMC1Q8NDZ2 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
SIMC1Q8NDZ2 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SIMC1Q8NDZ2 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
SIMC1Q8NDZ2 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.5□□□□□ -0.09
SIMC1Q8NDZ2 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
SIMC1Q8NDZ2 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SIMC1Q8NDZ2 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
SIMC1Q8NDZ2 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SIMC1Q8NDZ2 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SIMC1Q8NDZ2 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SIMC1Q8NDZ2 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SIMC1Q8NDZ2 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC14.5□□□□□ -0.09
SIMC1Q8NDZ2 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
SIMC1Q8NDZ2 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
SIMC1Q8NDZ2 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
SIMC1Q8NDZ2 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.5□□□□□ -0.09
SIMC1Q8NDZ2 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.5□□□□□ -0.09
SIMC1Q8NDZ2 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SIMC1Q8NDZ2 GK-202ENST00000378941 458 ntTSL 3 BASIC14.5□□□□□ -0.09
SIMC1Q8NDZ2 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SIMC1Q8NDZ2 AC002472.2-201ENST00000442739 958 ntBASIC14.5□□□□□ -0.09
SIMC1Q8NDZ2 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms