Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 AC023024.2-201ENST00000623561 1993 ntBASIC12.78□□□□□ -0.36
ZNF439Q8NDP4 PARN-202ENST00000420015 2360 ntTSL 2 BASIC12.78□□□□□ -0.36
ZNF439Q8NDP4 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF439Q8NDP4 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF439Q8NDP4 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
ZNF439Q8NDP4 MECR-202ENST00000373791 2416 ntTSL 2 BASIC12.78□□□□□ -0.36
ZNF439Q8NDP4 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
ZNF439Q8NDP4 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF439Q8NDP4 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF439Q8NDP4 TK1-203ENST00000588734 1681 ntTSL 2 BASIC12.78□□□□□ -0.36
ZNF439Q8NDP4 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF439Q8NDP4 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
ZNF439Q8NDP4 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
ZNF439Q8NDP4 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF439Q8NDP4 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF439Q8NDP4 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF439Q8NDP4 AL133267.1-201ENST00000398220 340 ntBASIC12.78□□□□□ -0.36
ZNF439Q8NDP4 LBH-203ENST00000404397 543 ntTSL 4 BASIC12.78□□□□□ -0.36
ZNF439Q8NDP4 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC12.78□□□□□ -0.36
ZNF439Q8NDP4 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC12.78□□□□□ -0.36
ZNF439Q8NDP4 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
ZNF439Q8NDP4 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF439Q8NDP4 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC12.78□□□□□ -0.36
ZNF439Q8NDP4 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC12.78□□□□□ -0.36
ZNF439Q8NDP4 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC12.78□□□□□ -0.36
ZNF439Q8NDP4 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC12.78□□□□□ -0.36
ZNF439Q8NDP4 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC12.78□□□□□ -0.36
ZNF439Q8NDP4 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC12.78□□□□□ -0.36
ZNF439Q8NDP4 AL590560.3-201ENST00000623350 461 ntBASIC12.78□□□□□ -0.36
ZNF439Q8NDP4 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC12.78□□□□□ -0.36
ZNF439Q8NDP4 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
ZNF439Q8NDP4 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC12.78□□□□□ -0.36
ZNF439Q8NDP4 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF439Q8NDP4 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF439Q8NDP4 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF439Q8NDP4 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
ZNF439Q8NDP4 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC12.78□□□□□ -0.36
ZNF439Q8NDP4 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF439Q8NDP4 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF439Q8NDP4 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
ZNF439Q8NDP4 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
ZNF439Q8NDP4 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF439Q8NDP4 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF439Q8NDP4 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF439Q8NDP4 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF439Q8NDP4 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC12.78□□□□□ -0.36
ZNF439Q8NDP4 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF439Q8NDP4 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF439Q8NDP4 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
ZNF439Q8NDP4 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC12.78□□□□□ -0.36
ZNF439Q8NDP4 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC12.78□□□□□ -0.36
ZNF439Q8NDP4 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
ZNF439Q8NDP4 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC12.77□□□□□ -0.36
ZNF439Q8NDP4 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC12.77□□□□□ -0.36
ZNF439Q8NDP4 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
ZNF439Q8NDP4 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
ZNF439Q8NDP4 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
ZNF439Q8NDP4 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.36
ZNF439Q8NDP4 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC12.77□□□□□ -0.36
ZNF439Q8NDP4 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
ZNF439Q8NDP4 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
ZNF439Q8NDP4 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
ZNF439Q8NDP4 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
ZNF439Q8NDP4 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
ZNF439Q8NDP4 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.36
ZNF439Q8NDP4 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
ZNF439Q8NDP4 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
ZNF439Q8NDP4 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC12.77□□□□□ -0.36
ZNF439Q8NDP4 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
ZNF439Q8NDP4 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC12.77□□□□□ -0.37
ZNF439Q8NDP4 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ZNF439Q8NDP4 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC12.77□□□□□ -0.37
ZNF439Q8NDP4 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ZNF439Q8NDP4 AC091951.1-201ENST00000512854 2465 ntBASIC12.77□□□□□ -0.37
ZNF439Q8NDP4 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
ZNF439Q8NDP4 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ZNF439Q8NDP4 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
ZNF439Q8NDP4 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
ZNF439Q8NDP4 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC12.77□□□□□ -0.37
ZNF439Q8NDP4 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC12.77□□□□□ -0.37
ZNF439Q8NDP4 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC12.77□□□□□ -0.37
ZNF439Q8NDP4 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC12.77□□□□□ -0.37
ZNF439Q8NDP4 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC12.77□□□□□ -0.37
ZNF439Q8NDP4 TSSK5P-201ENST00000423978 907 ntBASIC12.77□□□□□ -0.37
ZNF439Q8NDP4 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC12.77□□□□□ -0.37
ZNF439Q8NDP4 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC12.77□□□□□ -0.37
ZNF439Q8NDP4 AC044860.1-202ENST00000559481 777 ntBASIC12.77□□□□□ -0.37
ZNF439Q8NDP4 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC12.77□□□□□ -0.37
ZNF439Q8NDP4 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC12.77□□□□□ -0.37
ZNF439Q8NDP4 UBL5-208ENST00000593087 320 ntTSL 3 BASIC12.77□□□□□ -0.37
ZNF439Q8NDP4 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
ZNF439Q8NDP4 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
ZNF439Q8NDP4 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
ZNF439Q8NDP4 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ZNF439Q8NDP4 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ZNF439Q8NDP4 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ZNF439Q8NDP4 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
ZNF439Q8NDP4 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
ZNF439Q8NDP4 GOLGA8DP-202ENST00000341390 2184 ntBASIC12.77□□□□□ -0.37
ZNF439Q8NDP4 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms