Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAM1L1Q8N609 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAM1L1Q8N609 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAM1L1Q8N609 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAM1L1Q8N609 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAM1L1Q8N609 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.11■□□□□ 0.01
TRAM1L1Q8N609 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAM1L1Q8N609 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAM1L1Q8N609 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAM1L1Q8N609 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
TRAM1L1Q8N609 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAM1L1Q8N609 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.11■□□□□ 0.01
TRAM1L1Q8N609 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.11■□□□□ 0.01
TRAM1L1Q8N609 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC15.11■□□□□ 0.01
TRAM1L1Q8N609 KRT17P8-201ENST00000540749 863 ntBASIC15.11■□□□□ 0.01
TRAM1L1Q8N609 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.11■□□□□ 0.01
TRAM1L1Q8N609 DUX4L47-201ENST00000566374 394 ntBASIC15.11■□□□□ 0.01
TRAM1L1Q8N609 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.11■□□□□ 0.01
TRAM1L1Q8N609 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAM1L1Q8N609 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAM1L1Q8N609 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAM1L1Q8N609 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAM1L1Q8N609 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAM1L1Q8N609 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAM1L1Q8N609 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
TRAM1L1Q8N609 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TRAM1L1Q8N609 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAM1L1Q8N609 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.11■□□□□ 0.01
TRAM1L1Q8N609 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.11■□□□□ 0.01
TRAM1L1Q8N609 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
TRAM1L1Q8N609 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAM1L1Q8N609 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAM1L1Q8N609 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAM1L1Q8N609 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAM1L1Q8N609 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.1■□□□□ 0.01
TRAM1L1Q8N609 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAM1L1Q8N609 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAM1L1Q8N609 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
TRAM1L1Q8N609 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAM1L1Q8N609 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TRAM1L1Q8N609 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.1■□□□□ 0.01
TRAM1L1Q8N609 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC15.1■□□□□ 0.01
TRAM1L1Q8N609 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.1■□□□□ 0.01
TRAM1L1Q8N609 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAM1L1Q8N609 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.1■□□□□ 0.01
TRAM1L1Q8N609 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAM1L1Q8N609 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAM1L1Q8N609 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TRAM1L1Q8N609 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TRAM1L1Q8N609 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAM1L1Q8N609 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
TRAM1L1Q8N609 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.1■□□□□ 0.01
TRAM1L1Q8N609 EIF3FP3-201ENST00000434851 1086 ntBASIC15.1■□□□□ 0.01
TRAM1L1Q8N609 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC15.1■□□□□ 0.01
TRAM1L1Q8N609 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
TRAM1L1Q8N609 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC15.1■□□□□ 0.01
TRAM1L1Q8N609 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC15.1■□□□□ 0.01
TRAM1L1Q8N609 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.1■□□□□ 0.01
TRAM1L1Q8N609 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC15.1■□□□□ 0.01
TRAM1L1Q8N609 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.1■□□□□ 0.01
TRAM1L1Q8N609 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
TRAM1L1Q8N609 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC15.1■□□□□ 0.01
TRAM1L1Q8N609 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.1■□□□□ 0.01
TRAM1L1Q8N609 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAM1L1Q8N609 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.1■□□□□ 0.01
TRAM1L1Q8N609 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAM1L1Q8N609 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAM1L1Q8N609 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.1■□□□□ 0.01
TRAM1L1Q8N609 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAM1L1Q8N609 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.1■□□□□ 0.01
TRAM1L1Q8N609 REXO1L2P-201ENST00000425429 2069 ntBASIC15.1■□□□□ 0.01
TRAM1L1Q8N609 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAM1L1Q8N609 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAM1L1Q8N609 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.1■□□□□ 0.01
TRAM1L1Q8N609 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
TRAM1L1Q8N609 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.1■□□□□ 0.01
TRAM1L1Q8N609 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAM1L1Q8N609 ZBED1P1-201ENST00000502364 1930 ntBASIC15.09■□□□□ 0.01
TRAM1L1Q8N609 AL138709.1-201ENST00000614840 1693 ntBASIC15.09■□□□□ 0.01
TRAM1L1Q8N609 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAM1L1Q8N609 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAM1L1Q8N609 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
TRAM1L1Q8N609 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAM1L1Q8N609 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAM1L1Q8N609 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAM1L1Q8N609 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAM1L1Q8N609 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.09■□□□□ 0.01
TRAM1L1Q8N609 AC067930.6-201ENST00000623257 4947 ntBASIC15.09■□□□□ 0.01
TRAM1L1Q8N609 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAM1L1Q8N609 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
TRAM1L1Q8N609 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
TRAM1L1Q8N609 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
TRAM1L1Q8N609 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAM1L1Q8N609 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.09■□□□□ 0.01
TRAM1L1Q8N609 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAM1L1Q8N609 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAM1L1Q8N609 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
TRAM1L1Q8N609 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAM1L1Q8N609 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAM1L1Q8N609 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms