Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC20.61■□□□□ 0.89
XRN1Q8IZH2 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
XRN1Q8IZH2 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC20.61■□□□□ 0.89
XRN1Q8IZH2 HLA-DQB1-202ENST00000399079 1501 ntBASIC20.61■□□□□ 0.89
XRN1Q8IZH2 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
XRN1Q8IZH2 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
XRN1Q8IZH2 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
XRN1Q8IZH2 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
XRN1Q8IZH2 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC20.61■□□□□ 0.89
XRN1Q8IZH2 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC20.61■□□□□ 0.89
XRN1Q8IZH2 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC20.61■□□□□ 0.89
XRN1Q8IZH2 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
XRN1Q8IZH2 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC20.61■□□□□ 0.89
XRN1Q8IZH2 C2orf69P1-201ENST00000563532 1093 ntBASIC20.61■□□□□ 0.89
XRN1Q8IZH2 NAMA-206ENST00000605377 509 ntTSL 5 BASIC20.61■□□□□ 0.89
XRN1Q8IZH2 AP001184.1-201ENST00000637936 376 ntBASIC20.61■□□□□ 0.89
XRN1Q8IZH2 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
XRN1Q8IZH2 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
XRN1Q8IZH2 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
XRN1Q8IZH2 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
XRN1Q8IZH2 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
XRN1Q8IZH2 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
XRN1Q8IZH2 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC20.6■□□□□ 0.89
XRN1Q8IZH2 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC20.6■□□□□ 0.89
XRN1Q8IZH2 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
XRN1Q8IZH2 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
XRN1Q8IZH2 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
XRN1Q8IZH2 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC20.6■□□□□ 0.89
XRN1Q8IZH2 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
XRN1Q8IZH2 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
XRN1Q8IZH2 AL592076.1-201ENST00000424448 303 ntBASIC20.6■□□□□ 0.89
XRN1Q8IZH2 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC20.6■□□□□ 0.89
XRN1Q8IZH2 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC20.6■□□□□ 0.89
XRN1Q8IZH2 CR383656.3-201ENST00000551315 183 ntBASIC20.6■□□□□ 0.89
XRN1Q8IZH2 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC20.6■□□□□ 0.89
XRN1Q8IZH2 MIR3180-2-201ENST00000581748 88 ntBASIC20.6■□□□□ 0.89
XRN1Q8IZH2 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC20.6■□□□□ 0.89
XRN1Q8IZH2 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC20.6■□□□□ 0.89
XRN1Q8IZH2 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
XRN1Q8IZH2 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
XRN1Q8IZH2 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
XRN1Q8IZH2 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
XRN1Q8IZH2 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC20.6■□□□□ 0.89
XRN1Q8IZH2 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC20.6■□□□□ 0.89
XRN1Q8IZH2 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
XRN1Q8IZH2 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
XRN1Q8IZH2 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
XRN1Q8IZH2 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
XRN1Q8IZH2 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
XRN1Q8IZH2 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC20.59■□□□□ 0.89
XRN1Q8IZH2 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
XRN1Q8IZH2 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
XRN1Q8IZH2 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
XRN1Q8IZH2 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
XRN1Q8IZH2 RN7SL396P-201ENST00000471086 295 ntBASIC20.59■□□□□ 0.89
XRN1Q8IZH2 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC20.59■□□□□ 0.89
XRN1Q8IZH2 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC20.59■□□□□ 0.89
XRN1Q8IZH2 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
XRN1Q8IZH2 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC20.59■□□□□ 0.89
XRN1Q8IZH2 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
XRN1Q8IZH2 AC010491.1-201ENST00000563101 2797 ntBASIC20.59■□□□□ 0.89
XRN1Q8IZH2 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
XRN1Q8IZH2 REXO1L2P-201ENST00000425429 2069 ntBASIC20.59■□□□□ 0.89
XRN1Q8IZH2 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
XRN1Q8IZH2 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC20.59■□□□□ 0.89
XRN1Q8IZH2 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC20.59■□□□□ 0.89
XRN1Q8IZH2 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
XRN1Q8IZH2 STK16-203ENST00000409516 895 ntTSL 2 BASIC20.58■□□□□ 0.89
XRN1Q8IZH2 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC20.58■□□□□ 0.89
XRN1Q8IZH2 GUSBP10-201ENST00000417412 665 ntBASIC20.58■□□□□ 0.89
XRN1Q8IZH2 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC20.58■□□□□ 0.89
XRN1Q8IZH2 AL354861.1-201ENST00000445213 355 ntBASIC20.58■□□□□ 0.89
XRN1Q8IZH2 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC20.58■□□□□ 0.89
XRN1Q8IZH2 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
XRN1Q8IZH2 AC007952.4-201ENST00000573866 637 ntBASIC20.58■□□□□ 0.89
XRN1Q8IZH2 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
XRN1Q8IZH2 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
XRN1Q8IZH2 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
XRN1Q8IZH2 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC20.58■□□□□ 0.89
XRN1Q8IZH2 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC20.58■□□□□ 0.89
XRN1Q8IZH2 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
XRN1Q8IZH2 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC20.58■□□□□ 0.89
XRN1Q8IZH2 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
XRN1Q8IZH2 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC20.58■□□□□ 0.89
XRN1Q8IZH2 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
XRN1Q8IZH2 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC20.58■□□□□ 0.88
XRN1Q8IZH2 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC20.58■□□□□ 0.88
XRN1Q8IZH2 AC092638.2-201ENST00000441105 947 ntBASIC20.58■□□□□ 0.88
XRN1Q8IZH2 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC20.58■□□□□ 0.88
XRN1Q8IZH2 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC20.58■□□□□ 0.88
XRN1Q8IZH2 ALG1L13P-202ENST00000519320 584 ntBASIC20.58■□□□□ 0.88
XRN1Q8IZH2 AC138466.4-201ENST00000623965 852 ntBASIC20.58■□□□□ 0.88
XRN1Q8IZH2 WAC-202ENST00000347934 2839 ntTSL 5 BASIC20.58■□□□□ 0.88
XRN1Q8IZH2 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
XRN1Q8IZH2 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
XRN1Q8IZH2 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
XRN1Q8IZH2 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
XRN1Q8IZH2 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
XRN1Q8IZH2 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC20.57■□□□□ 0.88
XRN1Q8IZH2 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms