Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
C9orf40Q8IXQ3 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
C9orf40Q8IXQ3 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
C9orf40Q8IXQ3 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
C9orf40Q8IXQ3 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
C9orf40Q8IXQ3 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
C9orf40Q8IXQ3 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
C9orf40Q8IXQ3 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.1□□□□□ -0.15
C9orf40Q8IXQ3 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
C9orf40Q8IXQ3 AL138709.1-201ENST00000614840 1693 ntBASIC14.1□□□□□ -0.15
C9orf40Q8IXQ3 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
C9orf40Q8IXQ3 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
C9orf40Q8IXQ3 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
C9orf40Q8IXQ3 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.1□□□□□ -0.15
C9orf40Q8IXQ3 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
C9orf40Q8IXQ3 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
C9orf40Q8IXQ3 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
C9orf40Q8IXQ3 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
C9orf40Q8IXQ3 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
C9orf40Q8IXQ3 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
C9orf40Q8IXQ3 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.1□□□□□ -0.15
C9orf40Q8IXQ3 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
C9orf40Q8IXQ3 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.1□□□□□ -0.15
C9orf40Q8IXQ3 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
C9orf40Q8IXQ3 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.1□□□□□ -0.15
C9orf40Q8IXQ3 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC14.1□□□□□ -0.15
C9orf40Q8IXQ3 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
C9orf40Q8IXQ3 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
C9orf40Q8IXQ3 AC234783.1-201ENST00000441761 496 ntBASIC14.1□□□□□ -0.15
C9orf40Q8IXQ3 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC14.1□□□□□ -0.15
C9orf40Q8IXQ3 ACA64.2-201ENST00000459014 129 ntBASIC14.1□□□□□ -0.15
C9orf40Q8IXQ3 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC14.1□□□□□ -0.15
C9orf40Q8IXQ3 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC14.1□□□□□ -0.15
C9orf40Q8IXQ3 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
C9orf40Q8IXQ3 AC022616.1-201ENST00000518688 554 ntBASIC14.1□□□□□ -0.15
C9orf40Q8IXQ3 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC14.1□□□□□ -0.15
C9orf40Q8IXQ3 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC14.1□□□□□ -0.15
C9orf40Q8IXQ3 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC14.1□□□□□ -0.15
C9orf40Q8IXQ3 APRT-204ENST00000563655 709 ntTSL 5 BASIC14.1□□□□□ -0.15
C9orf40Q8IXQ3 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC14.1□□□□□ -0.15
C9orf40Q8IXQ3 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
C9orf40Q8IXQ3 AC244669.2-201ENST00000612320 853 ntBASIC14.1□□□□□ -0.15
C9orf40Q8IXQ3 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC14.1□□□□□ -0.15
C9orf40Q8IXQ3 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
C9orf40Q8IXQ3 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
C9orf40Q8IXQ3 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC14.1□□□□□ -0.15
C9orf40Q8IXQ3 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
C9orf40Q8IXQ3 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
C9orf40Q8IXQ3 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
C9orf40Q8IXQ3 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
C9orf40Q8IXQ3 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
C9orf40Q8IXQ3 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
C9orf40Q8IXQ3 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.1□□□□□ -0.15
C9orf40Q8IXQ3 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
C9orf40Q8IXQ3 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
C9orf40Q8IXQ3 AL137783.1-201ENST00000623494 1896 ntBASIC14.1□□□□□ -0.15
C9orf40Q8IXQ3 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
C9orf40Q8IXQ3 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
C9orf40Q8IXQ3 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
C9orf40Q8IXQ3 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.1□□□□□ -0.15
C9orf40Q8IXQ3 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
C9orf40Q8IXQ3 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.09□□□□□ -0.15
C9orf40Q8IXQ3 LILRP1-201ENST00000444199 1370 ntBASIC14.09□□□□□ -0.15
C9orf40Q8IXQ3 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
C9orf40Q8IXQ3 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
C9orf40Q8IXQ3 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
C9orf40Q8IXQ3 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC14.09□□□□□ -0.15
C9orf40Q8IXQ3 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC14.09□□□□□ -0.15
C9orf40Q8IXQ3 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.09□□□□□ -0.15
C9orf40Q8IXQ3 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
C9orf40Q8IXQ3 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
C9orf40Q8IXQ3 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
C9orf40Q8IXQ3 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.09□□□□□ -0.15
C9orf40Q8IXQ3 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
C9orf40Q8IXQ3 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
C9orf40Q8IXQ3 FER1L4-210ENST00000615531 5998 ntBASIC14.09□□□□□ -0.15
C9orf40Q8IXQ3 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
C9orf40Q8IXQ3 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
C9orf40Q8IXQ3 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
C9orf40Q8IXQ3 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
C9orf40Q8IXQ3 OR8S1-201ENST00000310194 1080 ntBASIC14.09□□□□□ -0.15
C9orf40Q8IXQ3 ZBTB12BP-201ENST00000314232 1122 ntBASIC14.09□□□□□ -0.15
C9orf40Q8IXQ3 LBX2-201ENST00000341396 886 ntTSL 3 BASIC14.09□□□□□ -0.15
C9orf40Q8IXQ3 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC14.09□□□□□ -0.15
C9orf40Q8IXQ3 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC14.09□□□□□ -0.15
C9orf40Q8IXQ3 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC14.09□□□□□ -0.15
C9orf40Q8IXQ3 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC14.09□□□□□ -0.15
C9orf40Q8IXQ3 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
C9orf40Q8IXQ3 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
C9orf40Q8IXQ3 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC14.09□□□□□ -0.15
C9orf40Q8IXQ3 AC025279.2-201ENST00000569730 653 ntBASIC14.09□□□□□ -0.15
C9orf40Q8IXQ3 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC14.09□□□□□ -0.15
C9orf40Q8IXQ3 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
C9orf40Q8IXQ3 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC14.09□□□□□ -0.15
C9orf40Q8IXQ3 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC14.09□□□□□ -0.15
C9orf40Q8IXQ3 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.09□□□□□ -0.15
C9orf40Q8IXQ3 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.09□□□□□ -0.15
C9orf40Q8IXQ3 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
C9orf40Q8IXQ3 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.09□□□□□ -0.15
C9orf40Q8IXQ3 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms