Protein–RNA interactions for Protein: Q7Z5N4

SDK1, Protein sidekick-1, humanhuman

Predictions only

Length 2,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDK1Q7Z5N4 MIR4683-201ENST00000579659 81 ntBASIC15.17■□□□□ 0.02
SDK1Q7Z5N4 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SDK1Q7Z5N4 CDK7-214ENST00000626796 358 ntTSL 5 BASIC15.17■□□□□ 0.02
SDK1Q7Z5N4 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC15.17■□□□□ 0.02
SDK1Q7Z5N4 AC068587.8-201ENST00000641239 219 ntBASIC15.17■□□□□ 0.02
SDK1Q7Z5N4 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SDK1Q7Z5N4 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.17■□□□□ 0.02
SDK1Q7Z5N4 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
SDK1Q7Z5N4 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
SDK1Q7Z5N4 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
SDK1Q7Z5N4 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC15.17■□□□□ 0.02
SDK1Q7Z5N4 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC15.17■□□□□ 0.02
SDK1Q7Z5N4 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
SDK1Q7Z5N4 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SDK1Q7Z5N4 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SDK1Q7Z5N4 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
SDK1Q7Z5N4 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.17■□□□□ 0.02
SDK1Q7Z5N4 CICP13-201ENST00000422015 2789 ntBASIC15.17■□□□□ 0.02
SDK1Q7Z5N4 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
SDK1Q7Z5N4 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SDK1Q7Z5N4 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
SDK1Q7Z5N4 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SDK1Q7Z5N4 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.17■□□□□ 0.02
SDK1Q7Z5N4 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SDK1Q7Z5N4 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SDK1Q7Z5N4 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SDK1Q7Z5N4 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SDK1Q7Z5N4 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SDK1Q7Z5N4 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SDK1Q7Z5N4 HNRNPA1P41-201ENST00000397777 928 ntBASIC15.17■□□□□ 0.02
SDK1Q7Z5N4 AC104073.2-201ENST00000453737 312 ntBASIC15.17■□□□□ 0.02
SDK1Q7Z5N4 RN7SL181P-201ENST00000462921 277 ntBASIC15.17■□□□□ 0.02
SDK1Q7Z5N4 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC15.17■□□□□ 0.02
SDK1Q7Z5N4 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC15.17■□□□□ 0.02
SDK1Q7Z5N4 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SDK1Q7Z5N4 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC15.17■□□□□ 0.02
SDK1Q7Z5N4 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC15.17■□□□□ 0.02
SDK1Q7Z5N4 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SDK1Q7Z5N4 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
SDK1Q7Z5N4 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SDK1Q7Z5N4 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SDK1Q7Z5N4 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
SDK1Q7Z5N4 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
SDK1Q7Z5N4 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SDK1Q7Z5N4 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SDK1Q7Z5N4 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SDK1Q7Z5N4 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SDK1Q7Z5N4 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SDK1Q7Z5N4 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.16■□□□□ 0.02
SDK1Q7Z5N4 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SDK1Q7Z5N4 RN7SKP214-201ENST00000364208 315 ntBASIC15.16■□□□□ 0.02
SDK1Q7Z5N4 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.16■□□□□ 0.02
SDK1Q7Z5N4 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC15.16■□□□□ 0.02
SDK1Q7Z5N4 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC15.16■□□□□ 0.02
SDK1Q7Z5N4 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC15.16■□□□□ 0.02
SDK1Q7Z5N4 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC15.16■□□□□ 0.02
SDK1Q7Z5N4 AL596276.2-201ENST00000447525 331 ntBASIC15.16■□□□□ 0.02
SDK1Q7Z5N4 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC15.16■□□□□ 0.02
SDK1Q7Z5N4 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
SDK1Q7Z5N4 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SDK1Q7Z5N4 RN7SL555P-201ENST00000584742 339 ntBASIC15.16■□□□□ 0.02
SDK1Q7Z5N4 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SDK1Q7Z5N4 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SDK1Q7Z5N4 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.16■□□□□ 0.02
SDK1Q7Z5N4 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SDK1Q7Z5N4 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
SDK1Q7Z5N4 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
SDK1Q7Z5N4 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SDK1Q7Z5N4 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.16■□□□□ 0.02
SDK1Q7Z5N4 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SDK1Q7Z5N4 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SDK1Q7Z5N4 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
SDK1Q7Z5N4 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SDK1Q7Z5N4 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SDK1Q7Z5N4 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
SDK1Q7Z5N4 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SDK1Q7Z5N4 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SDK1Q7Z5N4 RN7SL11P-201ENST00000471305 293 ntBASIC15.16■□□□□ 0.02
SDK1Q7Z5N4 SUPT4H1P2-201ENST00000501248 353 ntBASIC15.16■□□□□ 0.02
SDK1Q7Z5N4 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC15.16■□□□□ 0.02
SDK1Q7Z5N4 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC15.16■□□□□ 0.02
SDK1Q7Z5N4 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC15.16■□□□□ 0.02
SDK1Q7Z5N4 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC15.16■□□□□ 0.02
SDK1Q7Z5N4 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC15.16■□□□□ 0.02
SDK1Q7Z5N4 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC15.16■□□□□ 0.02
SDK1Q7Z5N4 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC15.16■□□□□ 0.02
SDK1Q7Z5N4 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.16■□□□□ 0.02
SDK1Q7Z5N4 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.16■□□□□ 0.02
SDK1Q7Z5N4 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.16■□□□□ 0.02
SDK1Q7Z5N4 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SDK1Q7Z5N4 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.16■□□□□ 0.02
SDK1Q7Z5N4 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.15■□□□□ 0.02
SDK1Q7Z5N4 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.15■□□□□ 0.02
SDK1Q7Z5N4 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.15■□□□□ 0.02
SDK1Q7Z5N4 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SDK1Q7Z5N4 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SDK1Q7Z5N4 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SDK1Q7Z5N4 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
SDK1Q7Z5N4 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SDK1Q7Z5N4 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms