Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 KRT18P28-201ENST00000453838 1332 ntBASIC13.51□□□□□ -0.25
C11orf88Q6PI97 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
C11orf88Q6PI97 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
C11orf88Q6PI97 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
C11orf88Q6PI97 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
C11orf88Q6PI97 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
C11orf88Q6PI97 IGLL3P-201ENST00000412472 434 ntBASIC13.51□□□□□ -0.25
C11orf88Q6PI97 CNN2P11-201ENST00000429351 262 ntBASIC13.51□□□□□ -0.25
C11orf88Q6PI97 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC13.51□□□□□ -0.25
C11orf88Q6PI97 FAM185BP-201ENST00000443595 716 ntBASIC13.51□□□□□ -0.25
C11orf88Q6PI97 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
C11orf88Q6PI97 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC13.51□□□□□ -0.25
C11orf88Q6PI97 CEND1P1-201ENST00000451006 455 ntBASIC13.51□□□□□ -0.25
C11orf88Q6PI97 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC13.51□□□□□ -0.25
C11orf88Q6PI97 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC13.51□□□□□ -0.25
C11orf88Q6PI97 AP000344.2-201ENST00000512987 629 ntBASIC13.51□□□□□ -0.25
C11orf88Q6PI97 POLD4-207ENST00000531239 584 ntTSL 2 BASIC13.51□□□□□ -0.25
C11orf88Q6PI97 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC13.51□□□□□ -0.25
C11orf88Q6PI97 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC13.51□□□□□ -0.25
C11orf88Q6PI97 AC092865.6-201ENST00000642101 219 ntBASIC13.51□□□□□ -0.25
C11orf88Q6PI97 AC010327.5-201ENST00000586923 3061 ntBASIC13.51□□□□□ -0.25
C11orf88Q6PI97 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.51□□□□□ -0.25
C11orf88Q6PI97 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
C11orf88Q6PI97 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
C11orf88Q6PI97 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
C11orf88Q6PI97 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
C11orf88Q6PI97 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
C11orf88Q6PI97 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.51□□□□□ -0.25
C11orf88Q6PI97 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
C11orf88Q6PI97 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
C11orf88Q6PI97 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
C11orf88Q6PI97 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
C11orf88Q6PI97 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
C11orf88Q6PI97 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
C11orf88Q6PI97 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
C11orf88Q6PI97 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.5□□□□□ -0.25
C11orf88Q6PI97 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
C11orf88Q6PI97 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
C11orf88Q6PI97 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC13.5□□□□□ -0.25
C11orf88Q6PI97 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
C11orf88Q6PI97 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
C11orf88Q6PI97 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
C11orf88Q6PI97 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
C11orf88Q6PI97 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
C11orf88Q6PI97 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
C11orf88Q6PI97 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
C11orf88Q6PI97 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
C11orf88Q6PI97 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
C11orf88Q6PI97 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
C11orf88Q6PI97 AL137784.3-201ENST00000623858 2288 ntBASIC13.5□□□□□ -0.25
C11orf88Q6PI97 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC13.5□□□□□ -0.25
C11orf88Q6PI97 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.5□□□□□ -0.25
C11orf88Q6PI97 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
C11orf88Q6PI97 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC13.5□□□□□ -0.25
C11orf88Q6PI97 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
C11orf88Q6PI97 LBH-203ENST00000404397 543 ntTSL 4 BASIC13.5□□□□□ -0.25
C11orf88Q6PI97 PON3-203ENST00000427422 894 ntTSL 3 BASIC13.5□□□□□ -0.25
C11orf88Q6PI97 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
C11orf88Q6PI97 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
C11orf88Q6PI97 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC13.5□□□□□ -0.25
C11orf88Q6PI97 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC13.5□□□□□ -0.25
C11orf88Q6PI97 CYB561-216ENST00000582297 897 ntTSL 3 BASIC13.5□□□□□ -0.25
C11orf88Q6PI97 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC13.5□□□□□ -0.25
C11orf88Q6PI97 MED16-214ENST00000617672 554 ntTSL 5 BASIC13.5□□□□□ -0.25
C11orf88Q6PI97 CITED2-204ENST00000618718 901 ntTSL 2 BASIC13.5□□□□□ -0.25
C11orf88Q6PI97 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC13.5□□□□□ -0.25
C11orf88Q6PI97 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
C11orf88Q6PI97 SLC9A3P2-201ENST00000447821 2021 ntBASIC13.5□□□□□ -0.25
C11orf88Q6PI97 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
C11orf88Q6PI97 AC011477.6-201ENST00000604980 1927 ntBASIC13.5□□□□□ -0.25
C11orf88Q6PI97 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
C11orf88Q6PI97 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
C11orf88Q6PI97 AJ011931.1-201ENST00000618749 2492 ntBASIC13.5□□□□□ -0.25
C11orf88Q6PI97 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
C11orf88Q6PI97 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC13.5□□□□□ -0.25
C11orf88Q6PI97 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
C11orf88Q6PI97 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.5□□□□□ -0.25
C11orf88Q6PI97 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
C11orf88Q6PI97 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
C11orf88Q6PI97 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
C11orf88Q6PI97 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
C11orf88Q6PI97 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
C11orf88Q6PI97 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.49□□□□□ -0.25
C11orf88Q6PI97 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
C11orf88Q6PI97 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC13.49□□□□□ -0.25
C11orf88Q6PI97 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.49□□□□□ -0.25
C11orf88Q6PI97 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
C11orf88Q6PI97 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.49□□□□□ -0.25
C11orf88Q6PI97 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.49□□□□□ -0.25
C11orf88Q6PI97 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
C11orf88Q6PI97 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC13.49□□□□□ -0.25
C11orf88Q6PI97 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
C11orf88Q6PI97 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC13.49□□□□□ -0.25
C11orf88Q6PI97 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
C11orf88Q6PI97 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
C11orf88Q6PI97 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
C11orf88Q6PI97 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
C11orf88Q6PI97 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC13.49□□□□□ -0.25
C11orf88Q6PI97 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
C11orf88Q6PI97 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms